| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4125 |
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| Symbol | |
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| ID | 5735986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5272330 |
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| End bp | 5273958 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641281279 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001546885 |
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| Protein GI | 159900638 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACTAC AATTCCTAAG CCTACCAACA GTTTCATTGC GAAGCTGGGT TTTGGTAGGC
TTATTCAGTT TGGGGCTGGT AGGCTTATTG GGCTTAACCT TGGCAGGCAT TCGCCGTTGG
AGCAAGCCAC GCCAAGCAAC TGACGACCAT TTGAGCACGA TTGGCCGCAA CACTAGTATT
CCCTTTGCTC TACAAATGGC CAGTCGCATG CTTGATTTGG TCTTTGCGAT GATTCTTTAT
CGCTTTTTGG CTGCCGAAAC CGTTGGAGCC TACGACTTTG CGGCAGTGAT TGTCGTCAAT
TATTTTGGCA CAATTGCCGA TTGGGGCTTA ACGGTTTTGG CAACGCACGA AATTGTGCGC
CAGCCAAGCC AAGCGCCCCA AACATTTCGC ACAACGCTCT GGCTCCGTTT GCGTTTTGCA
ATTTTAGCCT TGCCAATTGC CGTGATTTTT GTGCTGATCT ACAACGGCTT GGCGCAGGCT
GAGATTACGG CGGTTGGCCT GACCAGTCAG CAAATTACGG TGATCACAAT TTTGATGCTG
ACCTTGTTTC CGGCGGCACT TTCGGCCAGC GTCACCGCTT GGTTGCAAGG CCACGAGCGC
TTGGTCGCGG CTGCGGTCGT CAATCTTTTG ACCAATATTG GGAGTGCAGC ATTTCGCTTA
ACTGCCTTGA TTTTGGGCTT TGGCATTATT GGGATTGCTA GCGGAGCCTT GGCGGGAGCA
TTGCTCAGCG CCCTCTTATT TTGGCTGGCG ATGCGGCGTT TCTTCCCCGA AGTAGCGTGG
TTTGGCCCAA CCTTACCCGC CAAACCCTTG CTCAAAGAGG GCTACCCGCT CTTGCTCAAT
AGTTTGTTGA TGACGATCTT TTTTCGTTTC GACACCATTT TGTTGAGCGC CTTCCACGGC
TTTGTGGTCT CGGCAACCTA TGGCGTAGCC TATAAACTGA TTAATTTCAC CCAAATTGTG
CCGCCAATTG TGGTTAACGC GATTTTCCCG ACGCTAATTC GCCGTTCCGG CGATGATCGA
GCTGGAATGA GTCGGGCTTA TGCTGGCACA TTGCGTATGT TGCTGAATTT AGCGTTTGGC
ATCGCCGTTG TGGCTACAAT TATCGCTGTG CCACTAACCA CATGGCTCGC CGATCGGCCT
GAATATTTGC CAGGCAGCGT CTATGCCTTG ATGATTACGA TTTGGTATTT ACCAGGCAGC
TATCTGAATG GCCTGACTCA ATATGTGATT ATCGCGCTGG GCAAGAAACA GGCAATTACT
AAGGCTTTTG GTTTAACTGC AATGGTCAAT TTGGGCTTGA ATATTTGGTT GATTCCACGC
TATAGCTATT TTGCCGCCGC CGCAATCACG ATTGTTTCTG AGCTTGTGTT ATTTTTGCCG
CTCTGGCTGG TACTACGCCG CGAACAGATT AACATCAACT TGGCGAGTTT ATTTTGGCGG
CCTGCGCTGG CAGCATTGCT GGCTGGTGGT ATCGGCTGGT TGTTGCTCAG CATCAATGTG
TATTTGGCAG GAGTCGTAAC CGGATTAATC TATGGCGCTG GCTTATGGTT CAGCGGCAGC
ATCGGCCAAA CAGAACGCGA ATTGGCTGCG CGGATGTTTA AAAAGTTACG CCCCCAAGCA
TCAAGCTGA
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| Protein sequence | MALQFLSLPT VSLRSWVLVG LFSLGLVGLL GLTLAGIRRW SKPRQATDDH LSTIGRNTSI
PFALQMASRM LDLVFAMILY RFLAAETVGA YDFAAVIVVN YFGTIADWGL TVLATHEIVR
QPSQAPQTFR TTLWLRLRFA ILALPIAVIF VLIYNGLAQA EITAVGLTSQ QITVITILML
TLFPAALSAS VTAWLQGHER LVAAAVVNLL TNIGSAAFRL TALILGFGII GIASGALAGA
LLSALLFWLA MRRFFPEVAW FGPTLPAKPL LKEGYPLLLN SLLMTIFFRF DTILLSAFHG
FVVSATYGVA YKLINFTQIV PPIVVNAIFP TLIRRSGDDR AGMSRAYAGT LRMLLNLAFG
IAVVATIIAV PLTTWLADRP EYLPGSVYAL MITIWYLPGS YLNGLTQYVI IALGKKQAIT
KAFGLTAMVN LGLNIWLIPR YSYFAAAAIT IVSELVLFLP LWLVLRREQI NINLASLFWR
PALAALLAGG IGWLLLSINV YLAGVVTGLI YGAGLWFSGS IGQTERELAA RMFKKLRPQA
SS
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