Gene Haur_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4088 
Symbol 
ID5735947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5220619 
End bp5221353 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID641281240 
Productsilent information regulator protein Sir2 
Protein accessionYP_001546848 
Protein GI159900601 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000992713 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTTAT CACTTGATCT ACGGCGCTAT CGCAATATCG TCGTATTGAC GGGGGCGGGA 
ATTTCGGTCG CTTCAGGGGT GCGACCGTTT CGCGGCCCGA ATGGAGTCTG GAACGAGTGG
GATATTGAAC GCTGCGCCAC CCGCACAGCA CTGGAGCAAT CTCCCCAGTT GGTTTGGCAA
GCTTTTGGGC CACTACGCAG CCAGCTACAA ACGACTCAGC CCAACGCCGC CCATCGAGCT
TTGGCTCGCT TTGAACAATC GTTGGGTAAG CATCAACGTT TTACCCTCAT CACCCAAAAT
ATTGATGGCT TGCACCAACT CGCTGGCAGC CGCAATTTGG TCGAGTTTCA TGGTAGCCTG
CGCCAAAGCC GCTGTAGTGA CGAGCAATGT GACCAGCCAA GTTTTGTTGA TCAGCGGGCG
CACACCCAAA CGCTGCCGCT CTGCCCAACC TGTGGCAAGC CTTTACGCCC AGATATTGTG
CTGTTTGAAG AGGCGATTCC AGTTTGGGCC GAAACCCAAG CCAAACGCAG CCTGCGCGAA
TGCGATTTCT TTTTGGCGGT GGGCACGTCG GGTACGGTGT TTCCTGCGGC AGCCTTTGCG
CGTACTGCTC AAATGTTGGG TGCACGCACA ATGTTGGTCA ATTTGGAGCC ACATGCTGCC
GACGATTCAG CCTTTGAAGA ACAGCAGATC GGGCGAGCTG AAGAGCTATT GCCCACGCTG
CTAGGAGTTG CTTAG
 
Protein sequence
MVLSLDLRRY RNIVVLTGAG ISVASGVRPF RGPNGVWNEW DIERCATRTA LEQSPQLVWQ 
AFGPLRSQLQ TTQPNAAHRA LARFEQSLGK HQRFTLITQN IDGLHQLAGS RNLVEFHGSL
RQSRCSDEQC DQPSFVDQRA HTQTLPLCPT CGKPLRPDIV LFEEAIPVWA ETQAKRSLRE
CDFFLAVGTS GTVFPAAAFA RTAQMLGART MLVNLEPHAA DDSAFEEQQI GRAEELLPTL
LGVA