| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4081 |
|---|
| Symbol | |
|---|
| ID | 5735940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5213440 |
|---|
| End bp | 5214510 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641281233 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_001546841 |
|---|
| Protein GI | 159900594 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGAA ATAGTTTTGG TCGGTTGTTC CGAATTTCAA CATGGGGCGA ATCCCATGGA
GTTGGCTTGG GCGTGGTGAT CGATGGTTGC CCCGCAGGTT TGGAGCTTGA TTTGGCTGCC
ATCCAAGCCC AATTGGATCG CCGTCGGGTT GGACAAAGCC GCATGACTTC GGCTCGGCGG
GAGCCTGATG AAGTTGAGAT TTTATCGGGC ATGTTTGAGG GTCGCACGAC TGGTACAGCC
TTGGCAATGC TGATTCGCAA TACCAACGCC CGATCCAGCG ATTACGATGC AATCAAACAT
TTATATCGAC CTGGCCATGC TGACCATAGT TACGATGCTA AATATGGCTT CCGTGATTAT
CGTGGTGGTG GTCGTTCGAG CGCACGCGAA ACCGCCGCGC GGGTTGCGGC TGGCGCAGTC
GCCCGCCAAA TCTTGGCCAC AATGGGCATT AGCTTGGTGG CCTATACGCT GAGTTTAGGC
CATCTCAAAG CCCAAATCAT CGACGAAAAC GAAATTGAAA ATAACATTAT GCGCTGCCCA
GACCCCGCTG TGGCCGAGCA GATGATCGCC TATGTCGATC AAGCCCGCCG CGATTTGGAT
TCGCTGGGTG GCGTGGTTGA GGTGCGGGCA CGTGGAGTTC CGGCTGGGCT AGGCGAGCCA
GTGTTTGATA AACTTGATGC TTTGATTGGT CATGCCATGT TTAGTATTCC CGCAGTCAAA
GCAGTCGAAA TTGGCTCAGG CATCGAGGCA GGCAATGCCC GTGGTTCGCA AAATAACGAT
CCATTTATCC AGCGAGCAGA TGGTAGCATT GGCACAAGCA GCAACCATGC TGGCGGGATT
TTGGGTGGCA TCAGCAGCAG CGAGGAGATT GTGGTGCGCC TGACGGCCAA ACCACCAGCT
TCAATCGCCC AAGAACAAAC CACGGTCGAT CAAGCGGGCG AACCTGCCAC AATTGTGGTC
AAAGGCCGCC ACGACCCAAC CGTCTTGCCG CGTTTAGTGC CAGTTGCCGA GGCGATGTTG
GCCTTGGTGC TGGTCGATTG TGTCTTGCAA CAACGTGCCG CCCGATTGTA G
|
|---|
| Protein sequence | MPGNSFGRLF RISTWGESHG VGLGVVIDGC PAGLELDLAA IQAQLDRRRV GQSRMTSARR
EPDEVEILSG MFEGRTTGTA LAMLIRNTNA RSSDYDAIKH LYRPGHADHS YDAKYGFRDY
RGGGRSSARE TAARVAAGAV ARQILATMGI SLVAYTLSLG HLKAQIIDEN EIENNIMRCP
DPAVAEQMIA YVDQARRDLD SLGGVVEVRA RGVPAGLGEP VFDKLDALIG HAMFSIPAVK
AVEIGSGIEA GNARGSQNND PFIQRADGSI GTSSNHAGGI LGGISSSEEI VVRLTAKPPA
SIAQEQTTVD QAGEPATIVV KGRHDPTVLP RLVPVAEAML ALVLVDCVLQ QRAARL
|
|---|
| |