Gene Haur_4080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4080 
Symbol 
ID5735939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5212417 
End bp5213433 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content54% 
IMG OID641281232 
Producthypothetical protein 
Protein accessionYP_001546840 
Protein GI159900593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACG ATCCGTTAAC CTCAAACCAA GCAGAATTAG CAGAGGCCGA GCCACGTCGG 
AGTAGCTCGG CCCCACCTCA ATTACGTGCG GCGATCAGTC GGGCATTATC ACGGCGCAAA
GCTGAATTGC AAAGCCAAAG CGTTGCTGAG GAAACGGTAG CTGTTGAAAT TGCGCCAACT
ATCGTTGCCG AGCCAGAGCC GCCGATGCCG CTACGGCAAG AGCGTTATCG GGTGGCGGCA
AGTCGCGCAT TAAGTCGTTT GCGGCCAAGC AGTGAAACTC CACAGATTGC TAATTCAACC
AGCAACCGAG GCCGTGATCG CACTCGTACT CGGTTGCGCC CGCCAACCTT GCCTAACCAA
CCTTTGCCCA AACTGCCAAC CGATCAACCG GTGCGGCGCG AATTGCCAGC CGCAGTTGTC
GCAGCCTTGC AGCCCGATAG CCTGCCCGCA CCAGAAATTC AGCGCCCGCC ATTGTGGGTG
GCCTTCGTGG CAGGCTTAGG TTGGACAGCG ATGTTGCTAT GGGTCTTTTT TGGCGGGCTT
TCGCCGCAAT CGGGCTTTGG AGTGCGTAGT TTGTTTGGCC TGGCAACTGT GGCGTTGGGC
TTAACCACGT GGCTGCCAAT GCAATGGGCC TTGCGTTTGC CAGCATTAAC GTGGCGTGGC
ACGGTTGGTT GGGCCATCAT TTTCTGGATC TTGGCTTTTG TGCCCGCACC AACTACCACG
ATTGCCGCAG GATTGCCCGA TTTGCCGATC TACTTGATCT TTCTGAGTGG GGTATTTTTG
GCTAGCAATG CCATGGTTTT GCCAATCGTC TATGTCTGGG GCATTCGGCG TTATCATAAT
CGGGCGCAGC GCTTTGATGT GCGGCGTTCG CATCGCCAAG CAGCCGAGGC TGGAATTTTT
TGCAGTTTGT GTGTGCTTTT GGCAGCAATG AACATTTTCG AGCCAGTTAC AGTGTTATTG
TTAATCGCCA TTTTGGTATT GAGCGAAATG GTGATTTTAT CGTTACAGGC CAAATAG
 
Protein sequence
MTDDPLTSNQ AELAEAEPRR SSSAPPQLRA AISRALSRRK AELQSQSVAE ETVAVEIAPT 
IVAEPEPPMP LRQERYRVAA SRALSRLRPS SETPQIANST SNRGRDRTRT RLRPPTLPNQ
PLPKLPTDQP VRRELPAAVV AALQPDSLPA PEIQRPPLWV AFVAGLGWTA MLLWVFFGGL
SPQSGFGVRS LFGLATVALG LTTWLPMQWA LRLPALTWRG TVGWAIIFWI LAFVPAPTTT
IAAGLPDLPI YLIFLSGVFL ASNAMVLPIV YVWGIRRYHN RAQRFDVRRS HRQAAEAGIF
CSLCVLLAAM NIFEPVTVLL LIAILVLSEM VILSLQAK