| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4078 |
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| Symbol | |
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| ID | 5735936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5208304 |
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| End bp | 5211090 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641281229 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001546838 |
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| Protein GI | 159900591 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.980246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAA TGACGATGTG GCAGCAATAT CTGTCGATTA AGCAAAAATA TGCCGATGTG
ATTCTGTTTT TCCGGCTAGG CGATTTTTAC GAAACTTTCG GCGATGATGC CAAGTTGATT
GCCGAGGTGC TTGATATTAC CCTGACGGTG CGTGGCCTCA GCAGCGATGA AAATACGCCG
ATGGCGGGTG TGCCCTATCA CGCCGCCGAT AATTATATTG AGCAACTGGT CAGTCGGGGC
TATCGCGTGG CAATCTGCGA ACAAATGGAT GAGATGGTGC ACAAAACCTT GCAAAAACGT
GAGGTTGTGC GGATTGTCAC GCCAGGCACT CTGACCGAGC CAACCATGCT CCAAGCTGAA
CGCAATAGCT ACCTTGCGGC AATTTTGGTT GATCGTGGCA ATGTTGGTTT GGCGTATGCC
GACCTAACCA CCGGCGAGTT TTGTGCCACC GAATTGCGCG GCAACGAGGC TTTGAAGCAA
CTTGAAGGCG AATTAGCGCG TTTGGGTGCG GCTGAACTCT TGGTTTCCGA TGCTCCTGAG
TTGCGTCCAG CCGGCATGGA AATTGCCAAA AAGCAGTTAG CCCAAGATCT TGCACCAATG
CGCAAGGCTG AACGCGAACG CTTGCTACCC CACGAACGCA CCGCCAAAAA AGTTGAAGGT
AATAACGAAA GCACGTGGGT TCAAGGCAAT GTCACCCAAT GGCCTAATTG GCATTGGGAT
GCCCGCACCG CTCGCGATGC CTTGCTCAAT CAATTTAAAA GCCAATCGCT TGATGGCTTT
GGCTTGGGCA ATAAAGCCCT CGCAACCCGC GCCGCAGGAG CATTAATTCA ATATTTGCAT
GAAACGCAGC GCGATAGTGT GGCCCAAGTT CGCAGCTTGC GGGTCTATGA TACAACTCGT
TTTATGTTTC TCGACCCCCA AACGCGGCGT AATTTGGAGC TAACCGAAGG TGCTGGTGGC
CAACGCAAAG GCTCGTTGAT TGCGGTGCTC GACCAAACCC GCACGCCGAT GGGTGCACGC
CTGTTACGCC AATGGATCTC ACAACCGCTG ATTGAGCTTG GCCCACTGAC CGAGCGCCAA
CAAGCCGTCA GTTGTTTTGT TGAAGAAACC TTGGTCCGCG GCGAGTTACG GGCCTTATTC
AAAGGGGTTG GCGATATCGA ACGCACAATC AATCGGGTGG TGCAAGGCAT TGCCACCCCG
CGTGATTTAG TGCGATTGCG CGAAGCGCTG CGCCTAACTC CCGATATTTT GAGCCAAATC
GAGCGTACAG GTTTGCGCTC AACCAGCCCA ACCGAGGCTG CGCCAAGTGA TGATGATCTG
TTTGATGACG AGCCAACAAG CAATCAAATC GATGCTTGTG CCGATATTTG CGAATTACTC
GAACAGGCGA TTGCCGATGA TCCGCCCGCC TTGCTTGGCA CATGGGATAA CGCCCGCAGC
GACGAAAATG TGATTCGCAA GGGTCATGCT GCCGAAATTG ATGCAATTGT TGAGGCTACT
CGCGATGCCG CCCGTTGGAT CAACGAACTT GAAGCCAAGG AACAGCAACG CACTGGCATC
AAAACGCTCA AAGTCAGCTA TAACAAAGTC TTTGGCTATT ACATCGAGGT AACCAAGGCC
AGCGGCGAAA CCCGCATTCC CGATGATTAC ATTCGCAAAC AAACCTTGGT CAATGCCGAG
CGCTATATCA CGCCAGAACT CAAAGAATAT GAATCGCTGA TTTTGAATGC CTCAGAAGCC
TTGAACGAAA AAGAGCGCCA AGCATTTCGC CTGATTTTGC GCCATTTGGC CAACGCTGGC
AATCGTTTGC TCGATTTAGC GCGAGCAATC GCCGAGTTTG ATGTCTATAG CACCTTGGCC
GAGGTGGCGG TGCGTCAGCG TTTTGTGCGG CCAACCTTGC GCCTCGACGA TGTATTTGTG
ATTCAAGGCG GGCGACATCC TGTGGTTGAG CACAATTTGA ACGAGCCATT TACCCCGAAT
GATGCTCATT TTGATGCTGA CCATCAGATT ATTGTGCTGA CTGGACCAAA CATGTCGGGC
AAAAGCACCT TTTTGCGCCA AGTGGCTTTG ATTGGCTTAA TGGCCCAAAT CGGCTCGTTT
GTGCCCGCTG ATTATGCCGA AATTGGCCTA CTCGACCGAA TTTTCACGCG GATTGGGGCA
CAAGACGATA TTGCTACCGG CCAATCGACC TTTATGGTTG AAATGATCGA GACCGCCAAT
ATTTTACATA ATGGGTCACC ACGATCGCTG ATTATTCTCG ATGAAATTGG CCGTGGCACC
AGCACCTACG ACGGGCTTTC GATTGCCCGC GCTGTGGTCG AATATATTCA TAATCAGCCG
CGCTTACGAG CCAAAACCCT GTTTGCAACC CACTACCACG AACTGACCGA GCTGGCTAAC
ATCTTGCCAC GGGTGCATAA TTGGACGTTG GCGGTGGCCG AAGAAGGCGA TCATGTAGTG
TTTTTGCGCA AAGTGATCGA GGGTGCGGCT GATCGCTCAT ATGGAATTCA TGTGGCTCAA
ATGGCGGGCT TGCCCCCAGC CGTGATTAAA CGTGCTACCG AAGTGCTGAG CGAGCTTGAA
GGTAAGGGTG ATCGGGAGCA GCGCCGCGAG GCCATGCGTC GCATGAACGC AGCAGGCAGT
TCGGCTGTGC CCCAAATGTC GCTATTTGCG AGCAACGAGC CAAATCCAGC GGTTGAGCTA
TTGCGCGAAA TGGATGTAAC CCAACTAACC CCAATCGAAG CCCTAACCAA ACTTTACGAA
TTACAACGTT TGGCTAAAGT GGAGTGA
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| Protein sequence | MSKMTMWQQY LSIKQKYADV ILFFRLGDFY ETFGDDAKLI AEVLDITLTV RGLSSDENTP
MAGVPYHAAD NYIEQLVSRG YRVAICEQMD EMVHKTLQKR EVVRIVTPGT LTEPTMLQAE
RNSYLAAILV DRGNVGLAYA DLTTGEFCAT ELRGNEALKQ LEGELARLGA AELLVSDAPE
LRPAGMEIAK KQLAQDLAPM RKAERERLLP HERTAKKVEG NNESTWVQGN VTQWPNWHWD
ARTARDALLN QFKSQSLDGF GLGNKALATR AAGALIQYLH ETQRDSVAQV RSLRVYDTTR
FMFLDPQTRR NLELTEGAGG QRKGSLIAVL DQTRTPMGAR LLRQWISQPL IELGPLTERQ
QAVSCFVEET LVRGELRALF KGVGDIERTI NRVVQGIATP RDLVRLREAL RLTPDILSQI
ERTGLRSTSP TEAAPSDDDL FDDEPTSNQI DACADICELL EQAIADDPPA LLGTWDNARS
DENVIRKGHA AEIDAIVEAT RDAARWINEL EAKEQQRTGI KTLKVSYNKV FGYYIEVTKA
SGETRIPDDY IRKQTLVNAE RYITPELKEY ESLILNASEA LNEKERQAFR LILRHLANAG
NRLLDLARAI AEFDVYSTLA EVAVRQRFVR PTLRLDDVFV IQGGRHPVVE HNLNEPFTPN
DAHFDADHQI IVLTGPNMSG KSTFLRQVAL IGLMAQIGSF VPADYAEIGL LDRIFTRIGA
QDDIATGQST FMVEMIETAN ILHNGSPRSL IILDEIGRGT STYDGLSIAR AVVEYIHNQP
RLRAKTLFAT HYHELTELAN ILPRVHNWTL AVAEEGDHVV FLRKVIEGAA DRSYGIHVAQ
MAGLPPAVIK RATEVLSELE GKGDREQRRE AMRRMNAAGS SAVPQMSLFA SNEPNPAVEL
LREMDVTQLT PIEALTKLYE LQRLAKVE
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