| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4070 |
|---|
| Symbol | |
|---|
| ID | 5735928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 5195478 |
|---|
| End bp | 5197031 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641281221 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_001546830 |
|---|
| Protein GI | 159900583 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0283869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTAA CAGCAGAAGA TATTCTTAGT CGTCTTAAAG CCAGCATCCA GCAACCTGTC
GGCGGAGACC CAACTGCGGT CAACGTCGGG ACGGTTGCCA GTGTTGGCGA CGGCGTGGCG
CGGATCTCAG GTCTGCGCGA TGTTATGGCT TCGGAGTTGC TTGAATTCAA GCAAACGAAG
TCAGGCGAAA CCGTCATGGG CATCGCGCTG AACTTGGAAA AAGATAACGT CGCTGCCGTT
ATTTTGGGCG ATTATCTCGA AATTGAAGAA GGCGACTTGG TACGCTCAAC TGGCAAGATT
ATTTCAGTGC CAGTTGGTCA AGAGTTGCTT GGCCGTGTCG TTGACCCACT GGGCCGCCCA
CTCGATGGCA AAGGCCCAAT CAGCGCCAGC AAAACCCGCG AAGTCGAACG GATCGCCCCG
GGTGTGATCG AGCGTAAATC GGTGAGCCAA CCAGTGCAAA CTGGGATCTT GGCGATCGAC
GCACTGATTC CAATCGGGCG TGGTCAACGT GAGTTGATCA TCGGCGACCG CCAAACTGGT
AAGACCGCGA TCGCGATCGA TACGATCATC AACCAACGCG GTCAAGGTAT GGTTTGTGTG
TATGTCGCAA TCGGCCAAAA GCGCTCGAAA GTGGCTCAAA CCATCACTAC GCTTGAGCAA
AATGGCGCGA TGGATTACAC CATCGTGGTC AATGCTTCAG CTTCAGAATC AGCAGCATTG
CAATATATCG CACCGTACTC AGGCTGTGCC ATCGCTGAAG AAGTGATGGA AGTCGGCGTA
ACGGTCGATG GCAACTTGGT CAAAGATGCC TTGATCATCT ATGACGATTT GTCGAAGCAC
GCTGTGGCTT ATCGCCAAGT GTCGTTGTTG CTGCGCCGCC CTCCAGGCCG CGAAGCCTAC
CCTGGCGACG TGTTCTACTT GCACTCACGC TTGTTGGAAC GCGCTGCCCG TTTGAGCGAA
GTCAATGGCG GTGGTTCGAT TACGGCCTTG CCAATCATCG AAACCCAAGC TAACGACGTT
TCAGCCTACA TTCCGACCAA CGTGATTTCG ATCACCGACG GTCAAATCTT CTTGGAATCG
GACTTGTTCT ATGCTGGCCA ACGCCCAGCT TTGAACGTTG GTATCTCGGT GAGCCGCGTA
GGTTCATCGG CCCAAACCAA AGCCATGAAG ACCGTTGCTG GTAAGATGAA GCTCGAATTG
GCGCAGTTCC GCGAATTGGC AGCCTTTGCG ATGTTTGCTT CTGATTTGGA TGCAGGCACC
AAGGCCCAAA TCGAACGCGG TCAACGCCTT TCAGAATTGC TCAAGCAACC ACAATACCAA
CCAATCGCTT TGGAAGACCA AGTGATTATT CTGTGGGTTG CTGGCAACGG CTTCTTGGAT
GATGTTCCAG TTGCTCGGAT CAACGACTTC AAGCGCGATT TCTGGCAGTT TATCCACAGC
AGCTATGCTG AGGTTGGCCG CGCGATCGCT AGCGAAAAAG TCTTGAGTGA AGCAACCATC
GCCAGCTTGC GCAAGGCCGT GACCGAATTC AAGCAAACGG CGAGTTATAA ATAG
|
|---|
| Protein sequence | MAVTAEDILS RLKASIQQPV GGDPTAVNVG TVASVGDGVA RISGLRDVMA SELLEFKQTK
SGETVMGIAL NLEKDNVAAV ILGDYLEIEE GDLVRSTGKI ISVPVGQELL GRVVDPLGRP
LDGKGPISAS KTREVERIAP GVIERKSVSQ PVQTGILAID ALIPIGRGQR ELIIGDRQTG
KTAIAIDTII NQRGQGMVCV YVAIGQKRSK VAQTITTLEQ NGAMDYTIVV NASASESAAL
QYIAPYSGCA IAEEVMEVGV TVDGNLVKDA LIIYDDLSKH AVAYRQVSLL LRRPPGREAY
PGDVFYLHSR LLERAARLSE VNGGGSITAL PIIETQANDV SAYIPTNVIS ITDGQIFLES
DLFYAGQRPA LNVGISVSRV GSSAQTKAMK TVAGKMKLEL AQFRELAAFA MFASDLDAGT
KAQIERGQRL SELLKQPQYQ PIALEDQVII LWVAGNGFLD DVPVARINDF KRDFWQFIHS
SYAEVGRAIA SEKVLSEATI ASLRKAVTEF KQTASYK
|
|---|
| |