| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4065 |
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| Symbol | |
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| ID | 5735923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5190483 |
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| End bp | 5192273 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641281216 |
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| Product | Alpha-amylase |
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| Protein accession | YP_001546825 |
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| Protein GI | 159900578 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.540437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACGGA CCACTCGCGC AATGGCGCGG CTGACACTGT TCGTCTTGGT TGTGATCATC
TTCTCGGTTG GCTTTTTTGG AACCGCTCCA CGGGCAACGC AAGCCCAAAC TACTCCACGC
ACGGCCTTCG TCCATTTATT CGAATGGAAA TGGACTGACA TCGCCAAAGA ATGCGAAAAT
TGGCTCGGCC CCAAGGGCTT CGCTGCTGTT CAAGTCTCGC CACCCCAAGA GCATATCCAA
GGCTCGCAAT GGTGGACGCG CTATCAACCA GTTAGCTATC AGATTCAAAG CCGCTCGGGC
ACTCGCGCCG AGTTCGCCAA CATGGTTTCA CGCTGTAAAG CTGTTGGGGT TGATATTTAT
GTCGATGCCG TGATCAACCA CATGACCGGC GTGGGCAGTG GCACGGGCGT AGCTGGCTCA
AGCTACACCA GCTACAATTA CCCCGGTAAT TATCAAACTC AAGATTTCCA CCACTGTGGC
CGCAATGGCA ACGACGATAT CAGCAACTAC CAAGATCGCT GGGAAGTTCA AAATTGTGAG
TTGGTTAACC TCGCCGATCT CAAAACTGAA TCAGATTATG TTCGCGGCAA ATTAGCTGCC
TATTTGAATG ATCTGCGCAG TTTGGGCGTA GCTGGCTTCC GCATTGATGC TGCCAAGCAT
ATGCCCGCCG CTGATATTGC CAACATCATG AGCCGCGCCA GCAATCCTTA CATCTATCAA
GAAGTGATTG ACCAAGGCGG CGAGCCAATT ACCTCAGGCG AATATACGGG CAACGGCGAT
GTGACTGAGT TCAAATACAG CACCAACATT GGCCGCATGT TCAAAACCGA CAAGCTTGCC
AACATGAGCA ACTTCGGCAC AGCTTGGGGC TTTATCGCCA GCGATAGTGC GGTGGTTTTC
ACCGATAACC ACGACAACCA ACGCGGCCAT GGCGGCGCTG GCAATGTCGT TACCTTCAAA
GATGGCAAAC TCTACGAACT TGCCAACGTC TTCGCTCTAG CTTGGCCCTA TGGCTATCCC
CAAGTCATGT CGAGCTACAA CTTCAGCAAC GGCGACCAAG GCCCACCCAG CAGCAATGTC
TACAATGGCA ACACCGCCGA TTGCGGTGGC AGCAACTGGG TTTGTGAACA TCGCTGGCGC
GGCATCGCCA ATATGGTTGG CTTCCGCAAC TACACTAGCA CAGCCTTCAG CACCAGCAAC
TGGTGGTCGA ATGGCAATAA TCAAATTTCG TTCAGCCGTG GCAGCTTGGG CTTCGTAGCA
ATCAACCGCG AAGGCAGCAG CTTGAGCCGC ACCTTTGCTA CGGGCTTGCC CGCCGGAACC
TACTGCGATG TAATTCACGG CGATTTCAAC AATGGCTCGT GCTCTGGCCC AACCATCAGC
GTCAACAGCA GTGGCCAAGC AACAATCACG GTCGCCGCAA TGGATTCAGT GGCAATTCAT
GGTGGCGCAA AAATCAATGG CACTAACCCA ACGCCAGTGC CAACCACCCC ACCAAGCGGC
AGCATCGCTG TCACCTTCAA CGAAAATGCC ACCACGGTTT GGGGCCAAAA TGTCTATGTG
ATTGGCAATG TCTCGGCACT TGGTAGCTGG AACACCGCCA ATGCTGTGTT GCTCTCATCA
GCAAGCTACC CAGTTTGGAG CAAGACAATC AACTTGCCAG CCAGCACCGC CATCGAATAC
AAATACATCA AGAAAGATGG TTCGGGCAAT GTGACCTGGG AAAGCGGTAG TAACCGTACA
TTTACCACGC CAAGCAGCGG CACGGTCACC CGCAACGATA CCTGGAAATA G
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| Protein sequence | MSRTTRAMAR LTLFVLVVII FSVGFFGTAP RATQAQTTPR TAFVHLFEWK WTDIAKECEN
WLGPKGFAAV QVSPPQEHIQ GSQWWTRYQP VSYQIQSRSG TRAEFANMVS RCKAVGVDIY
VDAVINHMTG VGSGTGVAGS SYTSYNYPGN YQTQDFHHCG RNGNDDISNY QDRWEVQNCE
LVNLADLKTE SDYVRGKLAA YLNDLRSLGV AGFRIDAAKH MPAADIANIM SRASNPYIYQ
EVIDQGGEPI TSGEYTGNGD VTEFKYSTNI GRMFKTDKLA NMSNFGTAWG FIASDSAVVF
TDNHDNQRGH GGAGNVVTFK DGKLYELANV FALAWPYGYP QVMSSYNFSN GDQGPPSSNV
YNGNTADCGG SNWVCEHRWR GIANMVGFRN YTSTAFSTSN WWSNGNNQIS FSRGSLGFVA
INREGSSLSR TFATGLPAGT YCDVIHGDFN NGSCSGPTIS VNSSGQATIT VAAMDSVAIH
GGAKINGTNP TPVPTTPPSG SIAVTFNENA TTVWGQNVYV IGNVSALGSW NTANAVLLSS
ASYPVWSKTI NLPASTAIEY KYIKKDGSGN VTWESGSNRT FTTPSSGTVT RNDTWK
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