Gene Haur_4035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4035 
Symbol 
ID5735897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5150931 
End bp5151827 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content51% 
IMG OID641281186 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001546795 
Protein GI159900548 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCTA ATTCGCTTGT GAGTGAACCA TCAATGGCGC AACCCAAAGC CTCACCAAAG 
GCACTACGCC CGAGCCGCTG GCTCACACCA TTGCTGGTGC ATGCGGTGTT GGGCAGCTAT
ACCCTATTGG CGATTGCGCC GGTGGTTTTG GTGGTGATGA ATTCATTCAA AGGCTCGCAA
GCAATTTTTC AACAACCCTA CTCGCTGCCA GTTGGCGCAA ATTTTGATCC GGTTGGCTAT
ACCACCGTCT TTGAACAAAC GGCAATCTTT CGCTATCTCG GCAATAGCTT GATGGTGACG
CTTGGCTCAA TTTTGCTGAT TTTGCTGTTT GGTGCAATGA CTGCCTTTGG TTTGACCGAA
TATCGTTTTC GCGGGCGCGG CTTTTTGACC TTATATGCCC TGATTGGCTT GATGATTCCG
ATTCGGTTGG CAACCGTGAG TATTCTCAAA TTGATGGTTA CCCTGAATCT GCAAGATACG
ATCTGGTCAT TGATTATGGT GTATAGCGCT CAAGGCTTGC CGATGGCAAT TTTTGTGCTT
TCGCAATATA TGCGCCAAGT GCCAACCGAC CTCAAGGATG CGGCGCGGCT GGATGGAGCC
AACGAATATC AAGTATTTTG GTTGGTTCTG CCCTTGATGC GCCCAGCCCT CGCGACCTTG
GCAATTTTCG TGATGCTGCC AATTTGGAAT GATCTGTGGT TTCCCTTGGT TTTAGCTCCT
GGTGAGGCTT CACGCACGCT CACGCTAGGC GCACAACAAT TCCTTGGTCA ATTCCAAACC
GATTGGAGCG CCTTGCTAGC GATGCTGACC TTGGCAATTG CCCCGGTTTT AGTGCTCTAC
CTCATTTTCT CGCGCCAACT GATTCGTGGC CTCACTGCTG GTACGGTCAA GGGGTAA
 
Protein sequence
MSSNSLVSEP SMAQPKASPK ALRPSRWLTP LLVHAVLGSY TLLAIAPVVL VVMNSFKGSQ 
AIFQQPYSLP VGANFDPVGY TTVFEQTAIF RYLGNSLMVT LGSILLILLF GAMTAFGLTE
YRFRGRGFLT LYALIGLMIP IRLATVSILK LMVTLNLQDT IWSLIMVYSA QGLPMAIFVL
SQYMRQVPTD LKDAARLDGA NEYQVFWLVL PLMRPALATL AIFVMLPIWN DLWFPLVLAP
GEASRTLTLG AQQFLGQFQT DWSALLAMLT LAIAPVLVLY LIFSRQLIRG LTAGTVKG