Gene Haur_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3998 
Symbol 
ID5735859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp5104678 
End bp5105643 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content51% 
IMG OID641281148 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_001546758 
Protein GI159900511 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATA AGGTGAGTAT TGGTATGGAT AGCCGTCGTA TTACGACCAC GCAACGTGAG 
ACAACTCGCC CGTTTAGCCT AAAAAGACAG CCGCGCCTTG GTGAAAGCAT CATCCAAGGA 
TTTTTGCTCT TTTGCGGTGT GCTTTCGATG TTCACAACGA TCGGGATCGT GGTTGTGCTT 
GGCTCAGAAT CAATTGCATT CTTTCGCCAA GTCAGCATTG TCGAATTTGT GACCAACACG 
GTTTGGTCGC CCCAAATTGA TGAGTTTGGG ATTTTGCCTT TGCTGCTCTC AACGTTGCTC 
ACTTCAACCA TCGCAATGTT TATTGCATTG CCAACCGGCC TCGCAGCGGC AATTTATCTG 
AGCGAATATG CCTCAAGCCG CGCTCGCAGC ATTCTCAAGC CAATCTTGGA AGTTTTGGCG 
GGCGTGCCAA CCGTGGTGTA TGGCTACTTT GCGCTCAAAT TTATGACACC AGTTCTCAAG 
GCAGTCTTTG GTGAGGCCAA TGTCAATATC TACAACATGG CTTCGGCAGG CTTGGTGATG 
GGGATTATGA TCATTCCCAT GGTGTCGTCG ATGAGTGAAG ATGCGCTCAG TGCTGTGCCA 
CGCGCCCTGC GTGAAGGGGC TTATGGCTTG GGTGCAACCC GCCTCGAAAC GGCAATCAAA 
GTAGTTTTGC CAGCGGGGAT TTCGGGGATT ATTGCGGCCT TTGTGGTGGC AATTTCGCGG 
GCAGTTGGTG AAACAATGAT TGTGGCGGTG GCGGCTGGTG CTAAACCAAC CTTTACCTTC 
AATCCATTCG AAGCCGCCGA AACCATGACT GGCCACATCG CACGGATTAG CGGTGGCGAC 
TTAAGTTATG CCAGCATCGA CTACAACAGT ATCTTTGCCA TCGGCTTGAC CCTGTTCTTG 
ATGACCCTCG GTCTCAATAT GGTCAGCCGT CGCTTGGTAC GCCGCTTCCG TGAGGTATAC 
GAATAA
 
Protein sequence
MDDKVSIGMD SRRITTTQRE TTRPFSLKRQ PRLGESIIQG FLLFCGVLSM FTTIGIVVVL 
GSESIAFFRQ VSIVEFVTNT VWSPQIDEFG ILPLLLSTLL TSTIAMFIAL PTGLAAAIYL 
SEYASSRARS ILKPILEVLA GVPTVVYGYF ALKFMTPVLK AVFGEANVNI YNMASAGLVM 
GIMIIPMVSS MSEDALSAVP RALREGAYGL GATRLETAIK VVLPAGISGI IAAFVVAISR 
AVGETMIVAV AAGAKPTFTF NPFEAAETMT GHIARISGGD LSYASIDYNS IFAIGLTLFL 
MTLGLNMVSR RLVRRFREVY E