| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3995 |
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| Symbol | |
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| ID | 5735856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5100143 |
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| End bp | 5102119 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641281145 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001546755 |
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| Protein GI | 159900508 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.480395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC CAGACTTGTT GGCCTACAAC CTAGCAACGC TCGAAAAAAT GCTGGCGGAA
GCTTTGCGCC ATGCCCGTGA GGGTGATGTG TTGTTTTTGG CGAGTTCGCC CTTAGCAACC
TGCCAGATTA TCGAACGTTG GTATGTTGCT GATACGCCCC AAGGTTCGGC TGAGCTTGGG
CGGGCAGTTC AGGCGCTGTT GTGGTGGCTG ATTGAGCGGA TTCGCCCCCA TGGTGAGCGC
CATTGGCTGG CCTTGCCTTG GCGAGCATAT AACGTGTTGG CGGGCTTTTA TATCGAAGGC
TTGCGGATTG CCGATCTCGC CGAGGCCATG GGCGTGGTCG AACAAACGAT CTATCCAATT
CGCAACCAAG CAGTGCAAAG CTTGGCCAAA TTGCTGCTCG AAGAGTTACA GCAACCAAGC
ACCACACTTC CCAACCATGC GATTATTGGG TTGTACCCGC AATTAACGGT TGCAGAACAA
ACCCTTGCCC GAATGTTGGC CTTCAATCAG CAACCACTAG CCCAACGTTG GCTGGAGCAT
TGGCTTGAAT TAAATGCGAT TGCCGAACCC ATAATTCAAC AATTAGCCGA TCATGGCCTG
ATTAAAAGTG AAAGTTTGGC CTTGGTTGAA AAGCTGCGGC CCTTTTTGCA AAGCCAAATT
AGCGCTCCCG AACGTCGGCG CTGGCATCAA CAATTAGCTG AATTATTACA ACCAAGCGAG
CCACTCCAAT CAATTCAGCA TTGGTTGCAA GCCCAGGCCT ATGATCAAGC AGCCAGCCTA
ATCATCGCTG AGCATCAAAC GATTGTTGAT AATTTGCAGG GTCGCGCACT GCGCGAATTG
TTGGCCCAGA TTCAAGCCCA CGATATTCAA CAACCACAGC TGTGGTTTCG GCTCAAGTTG
GTCAGTGGCG ATGTGGCCAT GACCATGAAC GATGTCCAAA CCGCCTTGGG CGAATATCAA
GCGGCTTTGG CTGCCAACGA GCCGTTGCTC AAAGCCGAGG CCTATTACAA GCGGGGCAAG
GCTTTTCGCT CGCAAAGCAC CATGGAAGCG CAAGCCCACT TCAACTATAG CATTGCGATT
TTGGAACGGG CCGCACCCAA CGACCCCTTG CGCTATCGGG TTTGTTTGGA GCAAGCATGG
ATGTGGTTTC AGGATCAGCG TGATTTTGAG CAGGCCCAAA CCAGCCTTGC GCAAGCCGCT
AGCTTGATCG ATCCGCTTGA TCGTGGGGCT TGGGCCGAGC TGGCTAACGC CCGCGGGATG
TTCTACGCTC ATCGCGGCGA GCATGCTGAG GCGATCAACC AGCATCAAGC GGCATGGTTG
GCGGCCAATG AGGTGAATCA TAGTTTACTT ATGACCCATA TCGCCCATAA TTTAGGCTAC
GATTATCTTG ATTTGGGCCA CTACTCGCAA GCGCTTGATT ATTTTGAGCA AAGCCTGAAC
TTGGCTAATC GCACGGGCAA TCGGCGCATG CAAGGCCTAT GTCAAAAAAG CATTGGGGCA
TGTTGCTTCT GGATGCAAGA ATTTACCCTA GCGGTCGAGC ATTATCTGGC GGCCTATCAG
ATTTTTGCGG CCATGCACAA CCACAATTGG CAAGCCAACA CTTGCTACGA TTTAGCCGAA
GCCTATGCTG AGCTTGGCCA AAGCCAACTG ATGCGCCATT ACTATGCCGA GGCGATTCAA
TTGGCCCAAG CGAGTGGCCT TGATCGCTTG TTAAACGATC TGCATGGCTT GGCCGAAAAC
TACCCGGGCC TGTACCCACC AACGATCGAA TTAAACGAGC GTCAGCAGCG AATTTTCGAT
TATCTCAAAC AACATCCTTC GATCACCAAC CGCGATTATC GTGAGCTAAC CCAAATTTCG
CCCAAGCAAG CCGCCCGCGA TCTGAATGAT TTGGTGGAGC GCAATGTTTT AGTGCGTTCT
GGTGATGGCC GTTCAACCAG CTACCAACTG CCTCAATCGA AGGCCAACGA AGCTTAA
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| Protein sequence | MNQPDLLAYN LATLEKMLAE ALRHAREGDV LFLASSPLAT CQIIERWYVA DTPQGSAELG
RAVQALLWWL IERIRPHGER HWLALPWRAY NVLAGFYIEG LRIADLAEAM GVVEQTIYPI
RNQAVQSLAK LLLEELQQPS TTLPNHAIIG LYPQLTVAEQ TLARMLAFNQ QPLAQRWLEH
WLELNAIAEP IIQQLADHGL IKSESLALVE KLRPFLQSQI SAPERRRWHQ QLAELLQPSE
PLQSIQHWLQ AQAYDQAASL IIAEHQTIVD NLQGRALREL LAQIQAHDIQ QPQLWFRLKL
VSGDVAMTMN DVQTALGEYQ AALAANEPLL KAEAYYKRGK AFRSQSTMEA QAHFNYSIAI
LERAAPNDPL RYRVCLEQAW MWFQDQRDFE QAQTSLAQAA SLIDPLDRGA WAELANARGM
FYAHRGEHAE AINQHQAAWL AANEVNHSLL MTHIAHNLGY DYLDLGHYSQ ALDYFEQSLN
LANRTGNRRM QGLCQKSIGA CCFWMQEFTL AVEHYLAAYQ IFAAMHNHNW QANTCYDLAE
AYAELGQSQL MRHYYAEAIQ LAQASGLDRL LNDLHGLAEN YPGLYPPTIE LNERQQRIFD
YLKQHPSITN RDYRELTQIS PKQAARDLND LVERNVLVRS GDGRSTSYQL PQSKANEA
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