Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3989 |
Symbol | |
ID | 5735850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 5088272 |
End bp | 5088988 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641281139 |
Product | glycosyl transferase family protein |
Protein accession | YP_001546749 |
Protein GI | 159900502 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.246532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACACA CCGACTACTC TGTTGATATC GTAATTCCGG TATTGAATGA AGAGCAGCAG CTAGAGCAAA GCGTCGTAGC CCTTCGCGAT TTTTTGCAGG CCTCGTGTCC TTATCGTTGG CGCATCGTTG TCGCCGATAA TGGCTCAACC GACCGCACGC CCCAAATTTG CCACGATCTG CGCAGTCGTT TTCCAGGCGA GGTCGATTTT GAGCGCTTGG AGCAACGTGG GCGAGGGCGG GCGTTGCGCA CTGCTTGGCT CAAAAGTTCA GCCGATATTT TGTGTTATAT GGATGTCGAT CTTTCGACCA ATCTCCGTGC GTTGCCACCA TTGCTCGCCG CATTAATTCA CAGCGATTAT AGCCTGGGCA CTGGCTCACG CTTGATGCAC GGGGCAATTG TTACGCGCCA ATGGAAGCGC GAAATGATTT CCCGCGCCTA CAATTTGTTG ATTCGCGTGC TATTTTGGCA TCGTTTTCGC GATGCTCAAT GTGGCTTCAA AGCAATTACC CGTCAAGCGG CCCAAGAACT CATCCCAATG GTGCGCGATA ACGAATGGTT TTTTGATACT GAATTATTGC TCAAAGCTGA ACGGCGCGGT TATCGTATTT TTGAAGTGCC CGTTGAATGG ATCGAAGACT TGGGCACAAC GGTCAAAATT GTTAAAACCG CTTGGCAAGA TATTAAAGGC TTGGTACGGG TTCGCTTGGG CGGCTAA
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Protein sequence | MAHTDYSVDI VIPVLNEEQQ LEQSVVALRD FLQASCPYRW RIVVADNGST DRTPQICHDL RSRFPGEVDF ERLEQRGRGR ALRTAWLKSS ADILCYMDVD LSTNLRALPP LLAALIHSDY SLGTGSRLMH GAIVTRQWKR EMISRAYNLL IRVLFWHRFR DAQCGFKAIT RQAAQELIPM VRDNEWFFDT ELLLKAERRG YRIFEVPVEW IEDLGTTVKI VKTAWQDIKG LVRVRLGG
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