Gene Haur_3989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3989 
Symbol 
ID5735850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5088272 
End bp5088988 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content51% 
IMG OID641281139 
Productglycosyl transferase family protein 
Protein accessionYP_001546749 
Protein GI159900502 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.246532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACACA CCGACTACTC TGTTGATATC GTAATTCCGG TATTGAATGA AGAGCAGCAG 
CTAGAGCAAA GCGTCGTAGC CCTTCGCGAT TTTTTGCAGG CCTCGTGTCC TTATCGTTGG
CGCATCGTTG TCGCCGATAA TGGCTCAACC GACCGCACGC CCCAAATTTG CCACGATCTG
CGCAGTCGTT TTCCAGGCGA GGTCGATTTT GAGCGCTTGG AGCAACGTGG GCGAGGGCGG
GCGTTGCGCA CTGCTTGGCT CAAAAGTTCA GCCGATATTT TGTGTTATAT GGATGTCGAT
CTTTCGACCA ATCTCCGTGC GTTGCCACCA TTGCTCGCCG CATTAATTCA CAGCGATTAT
AGCCTGGGCA CTGGCTCACG CTTGATGCAC GGGGCAATTG TTACGCGCCA ATGGAAGCGC
GAAATGATTT CCCGCGCCTA CAATTTGTTG ATTCGCGTGC TATTTTGGCA TCGTTTTCGC
GATGCTCAAT GTGGCTTCAA AGCAATTACC CGTCAAGCGG CCCAAGAACT CATCCCAATG
GTGCGCGATA ACGAATGGTT TTTTGATACT GAATTATTGC TCAAAGCTGA ACGGCGCGGT
TATCGTATTT TTGAAGTGCC CGTTGAATGG ATCGAAGACT TGGGCACAAC GGTCAAAATT
GTTAAAACCG CTTGGCAAGA TATTAAAGGC TTGGTACGGG TTCGCTTGGG CGGCTAA
 
Protein sequence
MAHTDYSVDI VIPVLNEEQQ LEQSVVALRD FLQASCPYRW RIVVADNGST DRTPQICHDL 
RSRFPGEVDF ERLEQRGRGR ALRTAWLKSS ADILCYMDVD LSTNLRALPP LLAALIHSDY
SLGTGSRLMH GAIVTRQWKR EMISRAYNLL IRVLFWHRFR DAQCGFKAIT RQAAQELIPM
VRDNEWFFDT ELLLKAERRG YRIFEVPVEW IEDLGTTVKI VKTAWQDIKG LVRVRLGG