Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3985 |
Symbol | gatA |
ID | 5735846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 5083485 |
End bp | 5084954 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641281135 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_001546745 |
Protein GI | 159900498 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.825512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGAGG ATGTGATTAT GGCCCTCCAT GAATTGACAA TTGCCGAGGC CCGCGCCCAA TTAGATCGCG GTGAGATTAC CTCGGTGCAA CTGACCGAGG CTCTGCTGGA ACGCATCGCC GCGTTAGAGC CAACCCTGCA TTCGTTTTTA ACTCAAACGC CCGATTTGGC CCTGCAACAA GCGCAAGCCG CCGACGAGCG CATCAAGGCT GGCAACGCCA CGAGCTTAAC TGGTATTCCC TTGGGCATTA AAGATGTGAT TGTCACCAAA GATGTGCGCA CTACCTGCGG CTCGAAAGTG CTGGAAAATT GGGTTCCGCC CTACGATGCC ACCGTCGTGA GCAAACTCAA CGAGGCTGGC ACGGTAACCC TCGGCAAGCT TAATATGGAT GAGTTTGCCA TGGGTTCATC CAATGAAAAT AGTGCGTTTG GCGGTACACG CAACCCATGG GATACCGAAC GTGTGCCTGG TGGCTCGTCG GGTGGTTCGG CGGCGGCGGT TGCTGCTGGC CAAGCTTTTG GCACATTGGG CACCGATACT GGTGGTTCAA TTCGCCAACC TGCCGCGTTG TGTGGCATCG TTGGTTTGAA GCCAACCTAC GGGCGGGTTT CACGCTATGG TTTGGTAGCC TTTGCCTCAT CACTCGATCA ATGTGGGCCG TTCGCCCGCA CGGTTGAAGA TGTGGCCTTG TTGCTCGAAA CGATTGCTGG TCATGATCCC AAAGATTCAA CCAGCGCCAA TTTGCCAGTA CCCGACTATC GTGCTAGCCT CACTGGCGAT ATTCGCGGCC TCAAAGTTGG CGTGCCCAGC GAATATTTCG TCGATGGTAT GGAGCCTGGG GTTGAAAAAG CCGTGCGCAC GGCGATCGAG CAGATTAAAG ATTTAGGTGC TGAAATTGTT GAGGTTTCGC TGCCCCACAC CAAATATGCC TTGCCCGTCT ATTACATCAT TGCGCCAGCC GAATGTAGCA CCAACTTGGC TCGCTTCGAT GGTGTGCGCT ATGGCGTGCG ATTAGAAGGC AATGGGCTGT TCGATGAAAT TGAATCGACG CGTGGCCAAT TGTTTGGCGC GGAAGTGCGC CGCCGGATTA TGCTTGGAAC GTATGCACTC TCATCGGGCT ATTACGATGC CTACTATCGC CGCGCCCAAC AAGTACGAAC CTTGATTCGC CGCGACTTCC AAGAAGTTTG GAGCAAAGTC GATCTATTGG CAGCACCAAC CTCGCCCAGC GTGGCCTTCA AAATTGGCGA AAAAGCTGAT GATCCAGTAG CGATGTATCT CTCGGATGTG TGTACATTGC CGATTAACTT AGCGGGTGTG CCTGGTTTGG TTGTACCCTG TGGCTTCAGC GACAATTTGC CAACAGGCCT GCAATTAATT GGCAAGCCAT TCGATGAAGC GACCTTGCTG CGCGTCGGCC ATGCCTACGA GCAAAATAAC AGCTGGCACA AACAACATCC TAATTTGTAG
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Protein sequence | MREDVIMALH ELTIAEARAQ LDRGEITSVQ LTEALLERIA ALEPTLHSFL TQTPDLALQQ AQAADERIKA GNATSLTGIP LGIKDVIVTK DVRTTCGSKV LENWVPPYDA TVVSKLNEAG TVTLGKLNMD EFAMGSSNEN SAFGGTRNPW DTERVPGGSS GGSAAAVAAG QAFGTLGTDT GGSIRQPAAL CGIVGLKPTY GRVSRYGLVA FASSLDQCGP FARTVEDVAL LLETIAGHDP KDSTSANLPV PDYRASLTGD IRGLKVGVPS EYFVDGMEPG VEKAVRTAIE QIKDLGAEIV EVSLPHTKYA LPVYYIIAPA ECSTNLARFD GVRYGVRLEG NGLFDEIEST RGQLFGAEVR RRIMLGTYAL SSGYYDAYYR RAQQVRTLIR RDFQEVWSKV DLLAAPTSPS VAFKIGEKAD DPVAMYLSDV CTLPINLAGV PGLVVPCGFS DNLPTGLQLI GKPFDEATLL RVGHAYEQNN SWHKQHPNL
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