Gene Haur_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3985 
SymbolgatA 
ID5735846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5083485 
End bp5084954 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content54% 
IMG OID641281135 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001546745 
Protein GI159900498 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.825512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAGG ATGTGATTAT GGCCCTCCAT GAATTGACAA TTGCCGAGGC CCGCGCCCAA 
TTAGATCGCG GTGAGATTAC CTCGGTGCAA CTGACCGAGG CTCTGCTGGA ACGCATCGCC
GCGTTAGAGC CAACCCTGCA TTCGTTTTTA ACTCAAACGC CCGATTTGGC CCTGCAACAA
GCGCAAGCCG CCGACGAGCG CATCAAGGCT GGCAACGCCA CGAGCTTAAC TGGTATTCCC
TTGGGCATTA AAGATGTGAT TGTCACCAAA GATGTGCGCA CTACCTGCGG CTCGAAAGTG
CTGGAAAATT GGGTTCCGCC CTACGATGCC ACCGTCGTGA GCAAACTCAA CGAGGCTGGC
ACGGTAACCC TCGGCAAGCT TAATATGGAT GAGTTTGCCA TGGGTTCATC CAATGAAAAT
AGTGCGTTTG GCGGTACACG CAACCCATGG GATACCGAAC GTGTGCCTGG TGGCTCGTCG
GGTGGTTCGG CGGCGGCGGT TGCTGCTGGC CAAGCTTTTG GCACATTGGG CACCGATACT
GGTGGTTCAA TTCGCCAACC TGCCGCGTTG TGTGGCATCG TTGGTTTGAA GCCAACCTAC
GGGCGGGTTT CACGCTATGG TTTGGTAGCC TTTGCCTCAT CACTCGATCA ATGTGGGCCG
TTCGCCCGCA CGGTTGAAGA TGTGGCCTTG TTGCTCGAAA CGATTGCTGG TCATGATCCC
AAAGATTCAA CCAGCGCCAA TTTGCCAGTA CCCGACTATC GTGCTAGCCT CACTGGCGAT
ATTCGCGGCC TCAAAGTTGG CGTGCCCAGC GAATATTTCG TCGATGGTAT GGAGCCTGGG
GTTGAAAAAG CCGTGCGCAC GGCGATCGAG CAGATTAAAG ATTTAGGTGC TGAAATTGTT
GAGGTTTCGC TGCCCCACAC CAAATATGCC TTGCCCGTCT ATTACATCAT TGCGCCAGCC
GAATGTAGCA CCAACTTGGC TCGCTTCGAT GGTGTGCGCT ATGGCGTGCG ATTAGAAGGC
AATGGGCTGT TCGATGAAAT TGAATCGACG CGTGGCCAAT TGTTTGGCGC GGAAGTGCGC
CGCCGGATTA TGCTTGGAAC GTATGCACTC TCATCGGGCT ATTACGATGC CTACTATCGC
CGCGCCCAAC AAGTACGAAC CTTGATTCGC CGCGACTTCC AAGAAGTTTG GAGCAAAGTC
GATCTATTGG CAGCACCAAC CTCGCCCAGC GTGGCCTTCA AAATTGGCGA AAAAGCTGAT
GATCCAGTAG CGATGTATCT CTCGGATGTG TGTACATTGC CGATTAACTT AGCGGGTGTG
CCTGGTTTGG TTGTACCCTG TGGCTTCAGC GACAATTTGC CAACAGGCCT GCAATTAATT
GGCAAGCCAT TCGATGAAGC GACCTTGCTG CGCGTCGGCC ATGCCTACGA GCAAAATAAC
AGCTGGCACA AACAACATCC TAATTTGTAG
 
Protein sequence
MREDVIMALH ELTIAEARAQ LDRGEITSVQ LTEALLERIA ALEPTLHSFL TQTPDLALQQ 
AQAADERIKA GNATSLTGIP LGIKDVIVTK DVRTTCGSKV LENWVPPYDA TVVSKLNEAG
TVTLGKLNMD EFAMGSSNEN SAFGGTRNPW DTERVPGGSS GGSAAAVAAG QAFGTLGTDT
GGSIRQPAAL CGIVGLKPTY GRVSRYGLVA FASSLDQCGP FARTVEDVAL LLETIAGHDP
KDSTSANLPV PDYRASLTGD IRGLKVGVPS EYFVDGMEPG VEKAVRTAIE QIKDLGAEIV
EVSLPHTKYA LPVYYIIAPA ECSTNLARFD GVRYGVRLEG NGLFDEIEST RGQLFGAEVR
RRIMLGTYAL SSGYYDAYYR RAQQVRTLIR RDFQEVWSKV DLLAAPTSPS VAFKIGEKAD
DPVAMYLSDV CTLPINLAGV PGLVVPCGFS DNLPTGLQLI GKPFDEATLL RVGHAYEQNN
SWHKQHPNL