| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3982 |
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| Symbol | |
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| ID | 5735843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5081069 |
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| End bp | 5081908 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641281132 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001546742 |
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| Protein GI | 159900495 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGC TCGATAAAGT AATTGTCATT ACTGGTGGCA GCCGTGGCTT GGGCTTGGCG
ATGGCCGAAG CAATGCTCAG CCAAGGAGCC AAAGTTGTGA TCGCTGGCCG CGATCAAGCT
AGCCTTGAAC AAGCCCTTGC TCAACTCAAA CGCCAATCGA GCCATGTGCT GGCAACAACT
TGCGATGTTG GCGATTTGGC AGCAATCGAA GCCTTGCGCG ATCAAACTAT CGCCCAGTTT
GGCAAACTCG ATGTCTGGGT CAACAATGCT GGCGTGGCTG GGCCTTATGG CGCGACTGTG
GCAATTCATC CCCGCGATTA TCGGCGTGTG ATCGACACCA ATATTTTTGG CACGTACCAT
GGCTCAATTA CTGCACTCAA ATATTTCCAA CAACAAGGCC ATGGCAAATT GATCAATCTG
TTTGGGCGTG GTGATACTGG GCCTGTGCCG TTTCAAACCG CCTATGGCGC TAGCAAAAGC
TGGGTGCGCA ACTTTACCTT GGCCCTCGCC AAAGAACATC GTAACCAAGG CATCGAAATT
TTGGGCTTTA ACCCAGGCTT GATGACCACC GATATGCTGA CCGATGTGCA AGTGATGGCG
GGCTACGAGT CCAAACTTGA AGCCCTCAGT ACCATTTTGC GCATGTGGGG CAATCCGCCT
AGTGTGCCGG CGCAAAAAGC GGTTTGGCTT GCATCGAAGG CCACCGATGG CCGCAATGGC
TTGAGCATCA GCCTACTTTC GCCACCACGC TTGTTGCTGG GCGCACTCAA AGAAGCAATT
CGGCGTGTAC GCGGCAAGCC TGCTCCAGCA TTACCAATCA AACTGACCAC CATCGATTAA
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| Protein sequence | MKLLDKVIVI TGGSRGLGLA MAEAMLSQGA KVVIAGRDQA SLEQALAQLK RQSSHVLATT
CDVGDLAAIE ALRDQTIAQF GKLDVWVNNA GVAGPYGATV AIHPRDYRRV IDTNIFGTYH
GSITALKYFQ QQGHGKLINL FGRGDTGPVP FQTAYGASKS WVRNFTLALA KEHRNQGIEI
LGFNPGLMTT DMLTDVQVMA GYESKLEALS TILRMWGNPP SVPAQKAVWL ASKATDGRNG
LSISLLSPPR LLLGALKEAI RRVRGKPAPA LPIKLTTID
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