| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3977 |
|---|
| Symbol | |
|---|
| ID | 5735838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 5076437 |
|---|
| End bp | 5077312 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641281127 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_001546737 |
|---|
| Protein GI | 159900490 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATCACTC TGGATTGTAA GCTCGCCGCG CGGACGCCCG AACGGCAACG CACGACGGTA
GATGTTGGCG GCGTTCGCAT CGGCGCGGAG GAAATTGTCG TCATCGCCGG CCCTTGCAGC
GTGGAAAACG AGGAGCAAAT TCTGGCGACG GCGCAGCATG TGCGCGCCGC GGGGGCGCAC
ATGCTGCGCG GCGGCGCCTA CAAGCCACGC ACGTCGCCAT ACGCGTTCCG CGGCCTGGGC
GAGGAAGGGC TTCAACTGTT GGCCAAAGCC CGCGAAGCAA CCGACCTGCC GGTGGTCACT
GAAGTGATGA CGCCGGCCGA TGTGGGATTG GTCGCCGAGT ACGCCGATAT GCTTCAGATT
GGCGCGCGGA ATATGCAGAA CTTCCATCTA TTGGAGGCCG TCGGCCGCAT CCAGAAGCCG
GTGTTGCTGA AACGCGGCAT GTCGGGGACG ATCCAGGAGT GGCTGCTTGC GGCGGAATAT
ATCTTGAACT GTGGTAACCC CAATGTCGTC CTGTGCGAGC GGGGCATCCG CACCTTCGAA
CCCAGCCTGC GCAACACGCT CGACCTCGGC GCCTTGGCCT TCGCCAAGGA ACTGAGCCAT
CTCCCGGTTA TCGCCGACCC CAGCCATGGC GTGGGGCGTC GCAGCCTGGT CGGCCCGCTT
GCCCTGGCCA GCCTCGCCGC CGGGGCCGAC GGGCTGATCT TGGAGGTCCA CCCACATCCC
GAGCGCTCGG TTTCGGACTC CCAGCAGACC GTGGATTGCG CCGAATTCGC CGACATTATG
CTGCGAGCGG ACGCGGTGGC CTCTGCCGTG GGGCGCAGAC TGCACCTGCC AGCGATCACG
CCCGCCTACG CCGAGGCGGC GGATGTTCCT GCCTGA
|
|---|
| Protein sequence | MITLDCKLAA RTPERQRTTV DVGGVRIGAE EIVVIAGPCS VENEEQILAT AQHVRAAGAH
MLRGGAYKPR TSPYAFRGLG EEGLQLLAKA REATDLPVVT EVMTPADVGL VAEYADMLQI
GARNMQNFHL LEAVGRIQKP VLLKRGMSGT IQEWLLAAEY ILNCGNPNVV LCERGIRTFE
PSLRNTLDLG ALAFAKELSH LPVIADPSHG VGRRSLVGPL ALASLAAGAD GLILEVHPHP
ERSVSDSQQT VDCAEFADIM LRADAVASAV GRRLHLPAIT PAYAEAADVP A
|
|---|
| |