| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3948 |
|---|
| Symbol | |
|---|
| ID | 5735810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 4951524 |
|---|
| End bp | 4953368 |
|---|
| Gene Length | 1845 bp |
|---|
| Protein Length | 614 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641281100 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
|---|
| Protein accession | YP_001546710 |
|---|
| Protein GI | 159900463 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0194112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAA TTGTTGGATA TGTTGGCCCA CGCGAAGCAA CCGATGTGAT TGTGCGGGGC
TTAGAGTTAT TAGAATATCG CGGCTACGAT TCAGCGGGCA TCGCCATTTT AGAGGATGCC
GAATTTCAAA TGCGCCGCTC GGTTGGCAAG CTGGTTAATT TGCGCCGCCG TTTGCATGCC
GAGCCAACCG CTGGTCATCA AGGCATCGGC CACACCCGTT GGGCCACGCA CGGCGCAGTC
ACCGAAGCCA ATGCCCACCC CCATCGCGAT AATAGTGGCC GCATCGTGGT GATTCAAAAT
GGGATTGTTG AGAATTATCT CGAAATTAAA GGTCGGTTGA TTGAACAAGG TGTTCGCTTT
CATTCGCAAA CCGATACCGA AGTCATTGCC CAAATGCTTG GGTTATATAC CGCCGAATAT
GGCGATTTTC AACGCGCTTT CGGCCAAGTG ATGAGTGAAT TACGTGGTGG TAATGCAGTT
GTAGCTATGG ATCAAACCCA GCCTGATTTG ATTTTAGCGG CCCGAATTGG CAATGCTGGG
GCAGTGGTAA TTGGCCATGG TGATACTGAA AATTTCGTCG CCTCCGATTT GCCAGCAATT
GTCGATTACA CCCAACATAT GGTCTTCCTC GAAGATGGCG AGATGGCGAT CGTGCGATCA
ACCGGCGTGG AATATGTCAA GCTCGATGGC ACGCCAATCA GCAAAACGCC TACCACCGTT
GCATGGGACC CCGTATCGGC GGCCAAAGGT GGTTACAAAC ACTTTATGCA TAAAGAGATT
TTCGAGCAAC CACGCACAAC AACCGACACA TTGCGCGGAC GAGTCGATCT CGAAGCCGGA
CGAATCGAGC TTGATGGACT GACGTTGAGC GATGCCGAAA TGCAAAAGCT CGATTGCATC
TATGCAGTAG CCTGTGGTAC TGCTTGGCAT GCCTGTTTGA TCAATAAATA TTTTATCGAA
ACCTTGGCCC GTGTACGAGT TGAAGTCGAT TATGGCTCCG AATTCCGCTA TCGTAATCCT
GTGATGAACG AACGCAGTTT ATTGCTGGCC TTGACCCAAT CGGGTGAAAC CGTCGATACC
TTGGCAGCAA TGGCTGAAGC CCGCGAACAA GGCGTAAAAA GTGTGGCAAT TTTGAATGCG
ATTGGTTCGC AAGCAGGCCG CTTGGCTGAT GGTGGCGCAA TCTACATTCA CTCAGGCCCA
GAAATTTCAG TGGCTTCAAC CAAAGTCTTC ACTGGTATGT TGATGGCAGG CTATCTGTTT
GCGCTGCGCT TGGCACAAGC TCGTGGCACG CTCACCAGCG CCGAAATTCG CGAACACATC
CAAGCGTTAA TCGAAATTCC CGCCAAAATC GACACTATGC TCAAAGATAC CGCCATTTAT
GATCAACTGG CGGATCTGTA TCATCACTCA ACCGATATGC TCTACCTTGG GCGCTGGGTC
AATGCCCCGA TTGCGCTCGA AGGTGCGCTC AAGATGAAGG AAATTAGCTA TATTCACGCC
GAGGGCTACC CCGCAGGCGA AATGAAGCAT GGCCCGATTG CCTTGATCGA TGAACGAATG
CCAGTGATTT GTATTGCGAC CAAAGATCAT GTCTATGAAA AGATGCTCTC GAATGTTGAG
CAAGTCATCG CACGAGGTGG TAAAGTGATT GCCTTGGTCA ATCCCAGCGA TGAACTTGTG
CGCTCCAAGG CTGATCATGT GATCGAAGTG CCTGAAACTA CACCGTTATT GGCAGCAGTG
TTGAATGTTG TGCCGATGCA ACTCTTCTCG TATGCCATGG CCGTGCGGCG TGGTGCTGAT
GTTGATCAGC CGCGTAACTT GGCCAAATCA GTCACTGTCG AATAG
|
|---|
| Protein sequence | MCGIVGYVGP REATDVIVRG LELLEYRGYD SAGIAILEDA EFQMRRSVGK LVNLRRRLHA
EPTAGHQGIG HTRWATHGAV TEANAHPHRD NSGRIVVIQN GIVENYLEIK GRLIEQGVRF
HSQTDTEVIA QMLGLYTAEY GDFQRAFGQV MSELRGGNAV VAMDQTQPDL ILAARIGNAG
AVVIGHGDTE NFVASDLPAI VDYTQHMVFL EDGEMAIVRS TGVEYVKLDG TPISKTPTTV
AWDPVSAAKG GYKHFMHKEI FEQPRTTTDT LRGRVDLEAG RIELDGLTLS DAEMQKLDCI
YAVACGTAWH ACLINKYFIE TLARVRVEVD YGSEFRYRNP VMNERSLLLA LTQSGETVDT
LAAMAEAREQ GVKSVAILNA IGSQAGRLAD GGAIYIHSGP EISVASTKVF TGMLMAGYLF
ALRLAQARGT LTSAEIREHI QALIEIPAKI DTMLKDTAIY DQLADLYHHS TDMLYLGRWV
NAPIALEGAL KMKEISYIHA EGYPAGEMKH GPIALIDERM PVICIATKDH VYEKMLSNVE
QVIARGGKVI ALVNPSDELV RSKADHVIEV PETTPLLAAV LNVVPMQLFS YAMAVRRGAD
VDQPRNLAKS VTVE
|
|---|
| |