| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3946 |
|---|
| Symbol | |
|---|
| ID | 5735807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4946861 |
|---|
| End bp | 4948624 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641281097 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_001546708 |
|---|
| Protein GI | 159900461 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0106209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCCAA ATGGCATGAT CTTGAATGAA ACCTATGAAA TTCGTGAGCG GATTGGCCAT
GGCGGCGGGG GCGCGGTCTA TGCTGCTTAC GATATTAAGT TGCGCAAAAT GGTGGCGCTC
AAACATTTGC ACCTTGAGGG TGACCATGCG ATCAAAGCCT TTGGCCATGA AGCTAGCCTG
TTGGCGAACT TAGAACACCC AAGCCTGCCC AAAGTCTATT TTAACTTCAA TAATGATGCT
GGCCAATTTT TGGTGATGGA TTTGATCGAT GGTGACGATT TGAGCACGAT GCTTGATCGT
CAAGGTGGGC CGTTGCCGGT TGAGCAAGTG TTGGCTTGGG CCGATCAATT ATTGAGCGTT
TTGACCTATC TGCATACATT TTATCGCCAG CCGATTATTC ACCGCGATAT TAAACCTGCC
AATATCAAAA TTACTAGCCG TGGCGAATTG AAATTGTTGG ATTTTGGCTT GGCAAAGGCC
GAGATTTTTA CCAATATGCG CAGTGCAATG CATAGTGTTC ATGGCTATAC CTTGACCTAT
GCACCACCTG AGCAGATTAA TCAAGAAGGC ACTGATCCAC GGAGTGATTT GTATTCGTTG
GGGGCGACGC TCTATCATTT ATTAACTGGG CGCACTCCAG CTGATGGTGA TGGCAAAACC
GCCGATGCTT TAGCCCGAAC CTTGGCGATG GCTAAACGCA AGCCCGACCC AATTATTGCC
CCCAAAAACT TCAATCCATC AATCCCTGAG CATGTCGATC AAGCGATTAT GCGTTCGTTG
GAGATTGATG CTGATGAGCG TTTTGCGTCG GCTGAGGAAT TTCGACTCGC CTTGGCCCAA
CCCTATGCGC CAGTCAATAA TGCCCAAACC AAAATTTTGC CATCGACAAT TAGCTCACGG
GCGATTACTG GGCCGCCCAA ACAACTAACC ACCCGCGAGC ATAGCCAACC AAGCCCAATC
ATCAGCAAAC CGCGAAGCAG CTATCCTGGG CAACCGTTGC CAGAAGCTGG GCCGCAGGCG
CAGCCAACCC CAAACTATAA ACGCTATTGG CCATTATTGC TGATTGTGTT GCTCGGCGGG
GCTGGTGGTG GTTGGTGGCT TAACCGCGAT CAGCAAACGC CAGTGGTCAC GCTTGAGCAA
AACACGAAAA CAGTGGTAGT AGCTCAGCCA AGCCAGTCCG CACCAACGAA TACCTTGATG
GGCGTGGCGG GACAACCAAC GATTACCTTG GGTGTTGCAA CCAATGAGCC AACGAGTGTC
GCCGTCGAGC AGGCTACAGC AACTAGCGAG CCAGCCCAAC CAACGACAGC GACCCAGCCA
ACTGCTCAGC CCGCTGCAAC CCCTCGCCCT GCAACCGCAA GACCAGCCAC TGCACGGCCT
GCGGCAACCA ACCCGCCTGT GGTGCAGCCG ACTAATCCAC CAGCAGTTCA GCCAACCAAT
CCACCTGCTC CTCCTATCGA TCGTGATGGT GATGGTGTGA CTGATGATGT TGATGGTTGT
CCTGATGTGG CTGGCCCAAA TAATGGTTGC CCTGCCCCAG TTGAGCCGAC CAATCCACCA
GCAGTTGCTG ATAGCGATGG CGATACGATT CCCGATGATC GCGATGCTTG CCCACGCGAG
CCTGGCGACC CATCGCGTAA TGGTTGCCCC AAGCCAGCTA ATACGCCAAC TGATCGACCA
ACTGATCGAC CAACTGATAG GCCAGTGCAA CCAACCGAGC GTCCAACCGA TAAACCAACC
GCCAAGCCGC CAGTAGTGCC TTAA
|
|---|
| Protein sequence | MFPNGMILNE TYEIRERIGH GGGGAVYAAY DIKLRKMVAL KHLHLEGDHA IKAFGHEASL
LANLEHPSLP KVYFNFNNDA GQFLVMDLID GDDLSTMLDR QGGPLPVEQV LAWADQLLSV
LTYLHTFYRQ PIIHRDIKPA NIKITSRGEL KLLDFGLAKA EIFTNMRSAM HSVHGYTLTY
APPEQINQEG TDPRSDLYSL GATLYHLLTG RTPADGDGKT ADALARTLAM AKRKPDPIIA
PKNFNPSIPE HVDQAIMRSL EIDADERFAS AEEFRLALAQ PYAPVNNAQT KILPSTISSR
AITGPPKQLT TREHSQPSPI ISKPRSSYPG QPLPEAGPQA QPTPNYKRYW PLLLIVLLGG
AGGGWWLNRD QQTPVVTLEQ NTKTVVVAQP SQSAPTNTLM GVAGQPTITL GVATNEPTSV
AVEQATATSE PAQPTTATQP TAQPAATPRP ATARPATARP AATNPPVVQP TNPPAVQPTN
PPAPPIDRDG DGVTDDVDGC PDVAGPNNGC PAPVEPTNPP AVADSDGDTI PDDRDACPRE
PGDPSRNGCP KPANTPTDRP TDRPTDRPVQ PTERPTDKPT AKPPVVP
|
|---|
| |