Gene Haur_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3944 
Symbol 
ID5735805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4943221 
End bp4943733 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content44% 
IMG OID641281095 
ProductTadE family protein 
Protein accessionYP_001546706 
Protein GI159900459 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000125282 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAA AGTCACGAGG GCAAGCCCTT GTTGAATTTG CCCTAGTTTT TCCCCTTATT 
ATGTCGTTCT TATTCGGTAC AATTGAGTTT GGCTTTTTAA CGTATTCATG GTCACAGGCC
AACTATGCAG CTCGACGTGG GGCTGAGCAA GCTTCGTCAG GCCCACCCAT TAGAGCACGA
ACTCCCGAGC AGTATATTAC TGATAATGAT GATGATTGTG TGAAAGCTAT TCGTGGGGCA
GCACTACGCA CGACAGTTGG TCTCCAACCT GGCTATGTGA AGATTTCGTA TCATCTATCG
GCTAATGATA CGACTATTCG CCAAGATAAT GCTTGGCCAA CAATTTACCG CCGAGCTGGC
TTTATTATTC AAGTACAAAT TCGATATTTT TATGAGCCAC TGACACCGGT TGGGGATGTA
TTCTTAGATA ATGTTGAAAT TGATGCAACC TCACGCCGCA CGATTGTCCG CTATGATTTT
TCGAGTATTG ATCCGCTGTC TGTTTGCCGT TAA
 
Protein sequence
MKRKSRGQAL VEFALVFPLI MSFLFGTIEF GFLTYSWSQA NYAARRGAEQ ASSGPPIRAR 
TPEQYITDND DDCVKAIRGA ALRTTVGLQP GYVKISYHLS ANDTTIRQDN AWPTIYRRAG
FIIQVQIRYF YEPLTPVGDV FLDNVEIDAT SRRTIVRYDF SSIDPLSVCR