| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3938 |
|---|
| Symbol | |
|---|
| ID | 5735799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4933487 |
|---|
| End bp | 4934254 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641281089 |
|---|
| Product | polyphosphate--glucose phosphotransferase |
|---|
| Protein accession | YP_001546700 |
|---|
| Protein GI | 159900453 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.935107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTT TGGGCATTGA TATTGGTGGT TCAGGCATCA AAGGGGCGCT GGTCGATGTC
GCCCAAGGCA CGATGATTGG CGAGCGCCTG CGCATTAGCA CGCCCCAACC AGCAACCCCC
GAGGCAGTTG CACAAACGGT TCAGCAATTA GTTCAACAAT TAAATTGGCA TGGCCCGATT
GGTTGCACCT TTCCGGCAAT CGTCAAAAAT GGCTATACCC TCAGCGCTGC CAACGTCGAT
CAAACTTGGA TTGGCGCAAA TGCTGATCAA TTGTTTGAGC AAGCGACTGG TTGCCCGTTT
CATATGCTCA ACGATGCCGA TGCGGCGGGT TTGGCCGAAA TGAAATATGG CGCGGGCAAA
GAACATAACG GCGTGGTGAT GATGTTGACC TTTGGCACAG GCATTGGCAG CGCTTTGTTC
GTCCAAGGTT TGTTGGTGCC AAATACTGAG CTGGGCCACT TAGAAATTCG CGGCAAAGAT
GCTGAACATC GCGCTTCGGA TCGCGTGCGC GAGGAAAAAG GCTGGGATTG GCCGAAATGG
GCCGAGAAAG TTAACGAGGT TTTAGCTCGC ATCGAAGCAC TCTTTTCACC CGATTTGTTG
ATTATGGGTG GTGGGGTCAG TAAACGCTTC GATAAATTTG GCCAGTATTT GCAAACCAAA
GCGCCACTCG TTCCAGCCAC ACTGCAAAAT AACGCTGGAA TTATCGGCGC GGCCTTGGCG
GCTAGCGAAT TGTTCGAGCA GGGTCACCAA ATTCCGAATG CCCACTAA
|
|---|
| Protein sequence | MAILGIDIGG SGIKGALVDV AQGTMIGERL RISTPQPATP EAVAQTVQQL VQQLNWHGPI
GCTFPAIVKN GYTLSAANVD QTWIGANADQ LFEQATGCPF HMLNDADAAG LAEMKYGAGK
EHNGVVMMLT FGTGIGSALF VQGLLVPNTE LGHLEIRGKD AEHRASDRVR EEKGWDWPKW
AEKVNEVLAR IEALFSPDLL IMGGGVSKRF DKFGQYLQTK APLVPATLQN NAGIIGAALA
ASELFEQGHQ IPNAH
|
|---|
| |