| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3937 |
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| Symbol | |
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| ID | 5735798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4931349 |
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| End bp | 4933454 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641281088 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_001546699 |
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| Protein GI | 159900452 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACGC TTGCTTTATT TAGTAGCCTA GCCCAAACCT TGCTTGCAAC CACACCTTTT
GAGCAGCGCA TGCAGCATTG TTTTGGGCTG TTGGCGGATA GCTATCCTCA GCTTGATTTA
CGCTTAACCT TATTAAACGA GCCTGATGCT CGTCCGCAAG TGGTTTTGCC GTTGCATCGT
ACCAGCGCCG TTTGGGATAA CACTCGCATG ATGCAGGTGG TGCGGCGGCG ACAACCAGTC
GTGATCGATC AACACACAGC TCCAGCCTTG CCACCCAGCC CGTTTACCAC CAGCGCAATT
GTTGCTAGCG AATGGCAAGC CGATATGCAA TGTTATTTGG GGCTGCCGAT TCAGTGGGAA
GGCCGCTTGT GGGGCGTGTT GGAAGCCCGC CGTAATGGTA CATTTAGCGC CAGCGAACGC
ACCTTATTGA GCAATTTGCT GCCCTTACTG GCCACCGCGA TCGGCGAAGC CCACTGGGGG
CGACCGATTC ATCATACCAG CAGCGAACAG CAGCTTGATG TACGGGCATT AACCCACGAT
TTAGAAATTG CGCCTGATGT GACAACGTTG TTGACAACGC TCTTGCAACG GGCCATCCAC
AGCGTCAAAG CCAGCGCTGG CGCGATTAAC TTGGTTGATC GTGAGCATGG CGAATATCGT
TTGATTGCCT CGCAAGGCTA CCCGCCAACC GCTGGAATTA GTGAGCGAAC ATCGTGGCCT
TGGAATGTTG GGGTGGTCGG GCGGGTGGCA CGCACTGGCA AGGCCGCCTT GTTGACCGAT
ATTGCCCACG ATAGCGAATG GCAACTTTCT ACCCCCGATG TGCGAGCCGA AATCGTCGTG
CCCGTGCGGG TCGAGGGCGA GGCATGGGCG GTGCTGGTGC TTTCGACCAA TCGTGAGCCA
ATCTTTACAA CCCGCGATCT TTATTTTATT CAGGCTTTGG CTGATGTGGC GGCGCGGCCA
TTACAACGGG CAACCAGTTA TAGCGAATTG CTCGAAGCCC GCATGCAATT GCAACAAACC
TTGGCTAGTT TGCCGCTGGG CTTGGCCTTG ACTGATGGCG AAGGCCGAAT TTTACGCACC
AATCCCGCCT GGTATCAACT TTGGCAAATT GAGCAGCCCG CCGATGAAAC TGCGCTCTAT
TTGCCGTGGG ATATTTTGCC CTTGCTGCTC AAACGGCTGT CGCATCCCTT GGAATTGACC
GATTTTTTTG CTGAATGCCA AGCTCAACCT GACGAAACCC TCGAATTAGC GCTGCGTTTG
AGCGAACCAC TTCAAGATTT AAAATTGCGT TCAACCCCAG TTAAAGATGC TCAGCACCAA
ATTACTGGGC GCTTGGTGGT GATTGAAGAT GTGACCCGCG AGCGTGAAAT CGACAAGATG
AAAAACGAGT TTGTGTCGGT GGTATCGCAT GAATTGCGTA CCCCGCTAAC CTCGATTTTG
GGCTATACCG AGTTGCTGTT AGCGCGTGAA TTCAAGCCAG TTGAACGTCA AGAGTTCGTC
CAAACCGTCT ATGATCAGGC CAACCAACTC TCGAAGATGG TCGATGATCT GCTGAATCTT
TCGCGTTTGG ATGCAGGCCA GATCAAGCTG AATCGTTGGG TGGTGTCGCT GCACCAAATT
ATTCGTGAAA TTACCAAGCA ACTTAACGAA ACATTGTCTG AAAAGCATCG TTTGTTAATT
GATATTCCCG AAGGCATTCC GCCAATCTTT GCCGATAAAG ATAAAGTGCG TCAGATTTTG
ACCAACCTGC TCTCGAATGC GATCAAATAT TCGCCCAATG GCGGCCAAGT AGCCTTGATT
GTACGTGAAT TGCGTAAAGT TCCGCCTGGT GCGCCGCCCT TGCCCAACGA GCGCTCGGTG
ATTATTGCGG TGCGCGACCA AGGTATGGGT ATTTCCGAAG AAGATTTGCC CAAGCTGTTT
ACGCGTTTTT TCCGCGTCGA TAACTCGACG ACTCGCAAAA TTGGCGGCAC AGGCTTAGGC
TTATCAATCA CCAAGGCCTT GATCGAGTTG CATGGCGGGC GAATTTGGGC CACCAGCACG
CTTGGCCGTG GCACAACCTT CTGGGTAACC TTGCCAATTG CCACTGAGTT AGCCCGCCGA
GGATGA
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| Protein sequence | MSTLALFSSL AQTLLATTPF EQRMQHCFGL LADSYPQLDL RLTLLNEPDA RPQVVLPLHR
TSAVWDNTRM MQVVRRRQPV VIDQHTAPAL PPSPFTTSAI VASEWQADMQ CYLGLPIQWE
GRLWGVLEAR RNGTFSASER TLLSNLLPLL ATAIGEAHWG RPIHHTSSEQ QLDVRALTHD
LEIAPDVTTL LTTLLQRAIH SVKASAGAIN LVDREHGEYR LIASQGYPPT AGISERTSWP
WNVGVVGRVA RTGKAALLTD IAHDSEWQLS TPDVRAEIVV PVRVEGEAWA VLVLSTNREP
IFTTRDLYFI QALADVAARP LQRATSYSEL LEARMQLQQT LASLPLGLAL TDGEGRILRT
NPAWYQLWQI EQPADETALY LPWDILPLLL KRLSHPLELT DFFAECQAQP DETLELALRL
SEPLQDLKLR STPVKDAQHQ ITGRLVVIED VTREREIDKM KNEFVSVVSH ELRTPLTSIL
GYTELLLARE FKPVERQEFV QTVYDQANQL SKMVDDLLNL SRLDAGQIKL NRWVVSLHQI
IREITKQLNE TLSEKHRLLI DIPEGIPPIF ADKDKVRQIL TNLLSNAIKY SPNGGQVALI
VRELRKVPPG APPLPNERSV IIAVRDQGMG ISEEDLPKLF TRFFRVDNST TRKIGGTGLG
LSITKALIEL HGGRIWATST LGRGTTFWVT LPIATELARR G
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