| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3914 |
|---|
| Symbol | |
|---|
| ID | 5735775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 4908012 |
|---|
| End bp | 4909160 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641281065 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001546676 |
|---|
| Protein GI | 159900429 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4842] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTGC CAATCGTTCA AATTCAGTAC CAACAGCTCG AACAACTCGC CCAACGCTTC
GCCAAGCAAC AAACCCAGGT TCAAGCAATT CTACAAAGCC TCAGGCAAAC TATCCAAGCG
CTTGAACATG GCGGCTGGAT GGGCGATGCA GCCACTGCCT GTTTCAAAGA ATTCCATGCC
GAGATCGTCC CTGCCTATTG CAAACTTCAG CATGTGTTTA GTGAAAGCCA AACCAGCTTA
AACCAAATAG CCCAGCTTTT TCACGAGGCT GAAGCCGAGG CTGCCGGATT ATTTCGGGGT
GAAATGGCGC AAGCAGTCGG CAACGCTAGC CCTTGGCAGA TCCTCAATCA TCTTGAAACA
AACCTATCCG AGCAACTCAG TCGCTTCCAA CCTGAAACTT TAGAACACAT GCTTGGTGCG
ATTGATCCTC AGTCATTTGA TATCACTACG GTGCTGGCGC TGATTGAGAA CGCCTCGCTG
GTCGAACGTC AAGCTATTTT GCAAAATCCA GAAGTATTAA ACTTAATCAG GGCCAGCGCA
GGTGATCAAG CATATATCGT GATGGCAGTC CTTTCAATTG GATCATTCCG GTGGTTAGCT
TCGCAACAAG GAGCAGATGG ATGTATTGCG ATCTTTCTCA CAGACCCGCT AACCCATGAA
CCTCGAACTA ACAATTTTGC CCAATGGATC TGCACCGTAC CTAATTCTAA TGAGCCTTCA
AGCCAAATAT CACCCCCAAA TCCGCTCACT GGCTCAATGA ATTGTTGGGA ATTTGTTTTA
TTTTCAGCAT TCTTGGGTGG AAATATCACC TATGACGAGC TTGATGCAGT CTATTCCGAG
GTTGGGACAC CAATCACGCT AGAAGAACAC AAACAAGCAA TTTATACTGC CCTTGGTGGT
GAACACAGCA CTGAGTGGAA TCCCTGTAAT GATATTCCTG CTGGCAGTAT TATCTTTTTC
GACGATGGCA GCAACCCAAT CGCCCACGTT GCCATTGCGA CAGGCCGTGA GATCAATGGG
TCACCCGAGT TAATTAGTTT GTGGGATCGG CCAAACACTA TCGATAGTGT GCAATTTACA
ACGATTGAGG CATTAAATGG CTCCGATTAC ACCATCAACG TTGCACCAAA CCCTTGGCTG
AACGATTAA
|
|---|
| Protein sequence | MSVPIVQIQY QQLEQLAQRF AKQQTQVQAI LQSLRQTIQA LEHGGWMGDA ATACFKEFHA
EIVPAYCKLQ HVFSESQTSL NQIAQLFHEA EAEAAGLFRG EMAQAVGNAS PWQILNHLET
NLSEQLSRFQ PETLEHMLGA IDPQSFDITT VLALIENASL VERQAILQNP EVLNLIRASA
GDQAYIVMAV LSIGSFRWLA SQQGADGCIA IFLTDPLTHE PRTNNFAQWI CTVPNSNEPS
SQISPPNPLT GSMNCWEFVL FSAFLGGNIT YDELDAVYSE VGTPITLEEH KQAIYTALGG
EHSTEWNPCN DIPAGSIIFF DDGSNPIAHV AIATGREING SPELISLWDR PNTIDSVQFT
TIEALNGSDY TINVAPNPWL ND
|
|---|
| |