| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3904 |
|---|
| Symbol | |
|---|
| ID | 5735765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4894787 |
|---|
| End bp | 4895950 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641281055 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_001546666 |
|---|
| Protein GI | 159900419 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCATCCCA AATCCGCCAA TCGCTTAGCT GGCTTTGGTA CATCAATTTT TAGTGAAATA
AGTGCTTTGG CTGCGCGTTA TCAAGCGATT AATCTCGGCC AAGGCTTTCC TGATTTTGCT
GGCCCAGCAT TTTTAAAAGA TGCTGCTTGT AGCGCTATCA ACGCTGATCT CAATCAATAT
GCGCCAAGCA CTGGCTTGCC AACCTTGCGA GCGGCGATTG CGCGGACATG GGAACGTCAT
AGCAAGGCCT CAGTTGACCC CGACGCTGAA ATTACCGTAA CTAGCGGGGC AACTGAAGCT
ATGTTTGCCA TAATTATGGC GTTGATTAAC CCTGGCGATG AGGTTTTGAT TTTCGAGCCG
TTCTATGATT CGTATCCGCC GAATGTGCTG ATGGCGGGAG GCATACCACG TTATATTCGC
TTGCACGAGC CACGCTGGGA TGTGGATTTT GCTCAAGTTC GTGCCGCAAT TACTCCCCAA
ACCAAGGCGA TTATTTTGAA CACGCCGCAT AATCCCACAG GCAAGGTTTG GTCGCGGGCC
GAATTGAGCC AATTAGCAAC GATTGCAATC GAGCATGATC TCTTGGTGAT CAGCGATGAA
GTTTATGATC GTTTGGTGTT TGAGGATTAT CAGCATTGCT CGATTGCCAC CTTGCCCGGC
ATGTGGGATC GTACAATCAC CATCAGTAGC ACTGGCAAAA CCTTTAGCGT CACAGGCTGG
AAAATTGGTT ATGCAATTGC CCCCAATTCA TTAACTGAGG CAATTCGGCG GGTGCATCAA
TTTGTGACCT TTGCCAGTGC CACGCCCTTG CAAGCAGCAG CGGTGGTTGG TTTAAACGCT
GGCGAACCCT ATGAACGCCA ACTATTGCAA TTTTATAATG CCCGCCGCGA GCAATTGGTG
AAGGTCTTGC GCGATGCTGG ATTGTATGTG TTGCCGCCGC AAGGCACCTA TTTCGTAATG
GCTGATATTC GTGATTTGGG CTGGGAGAAT GATGCAGAAT TTTGCCGTTA TCTGATTAGC
GAAATTGGCG TGGCGGCAAT TCCACCCTCA GCGTTTTACC ACGATGGCTA TCAATCAGGG
ATGGTACGCT TTTGCTTTGC CAAAAAGCCC GAAACAATTG CTGCCGCCGC TGAAAAACTC
AAGCAATTAG GGAGTCGAAG CTAA
|
|---|
| Protein sequence | MHPKSANRLA GFGTSIFSEI SALAARYQAI NLGQGFPDFA GPAFLKDAAC SAINADLNQY
APSTGLPTLR AAIARTWERH SKASVDPDAE ITVTSGATEA MFAIIMALIN PGDEVLIFEP
FYDSYPPNVL MAGGIPRYIR LHEPRWDVDF AQVRAAITPQ TKAIILNTPH NPTGKVWSRA
ELSQLATIAI EHDLLVISDE VYDRLVFEDY QHCSIATLPG MWDRTITISS TGKTFSVTGW
KIGYAIAPNS LTEAIRRVHQ FVTFASATPL QAAAVVGLNA GEPYERQLLQ FYNARREQLV
KVLRDAGLYV LPPQGTYFVM ADIRDLGWEN DAEFCRYLIS EIGVAAIPPS AFYHDGYQSG
MVRFCFAKKP ETIAAAAEKL KQLGSRS
|
|---|
| |