Gene Haur_3900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3900 
Symbol 
ID5735761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4892256 
End bp4893020 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content46% 
IMG OID641281051 
Productglycosyl transferase family protein 
Protein accessionYP_001546662 
Protein GI159900415 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCG AACGTCCAAG TATTTCGGTC TTCTTCCCTG CCTATAATGA TGCTGGCACC 
ATTGGTAGCT TGGTGATTAC AGCATTTCAC GTTTTACCCG AACTCACCGA TGATTATGAA
GTGATCGTGG TTAACGATGG TAGCAGCGAT TATACCGCGC AAGTGCTTGA TGATTTAGCC
ACCAAATATC CACGTTTCCG CCCAATTCAC CACCCCAAAA ACCGCGGTTA TGGCGGAGCG
TTACGCACAG GCTTTGCCTC GGCAACCAAA GATCTGGTGT TTTATACCGA TGGCGATGCC
CAATACGACC CCAACGAGTT GCGCGATTTG TATCAAGTGC TGACCCCTGA GGTTGATATT
GTCAACGGCT ATAAGATTGC CCGTTCTGAT CCATTGCATC GTAAAATTAT TGGCCGCATA
TATCACCATG GAGTCAAATT TTTATTTGGC TTTAAATTAC GTGATGTTGA TTGTGATTTT
CGGCTGATTC GCCGCAAAGT ATTCGATGTA GTCAATCTTG AATCCGATAG CGGCACAATC
TGCTTAGAAT TGGTCAAAAA ATTACAAGAT GCTGGGTTTA ATTTTGCTGA AGTGCCAGTC
CATCACTATC ATCGCACCTA TGGCAAATCG CAGTTTTTCA ATTTCCCCCG TTTGTGGCGC
ACGCTGATTC AGTTGTTGCA GCTTTGGTGG AAGTTGGTCA TCCTTGGCAA ACATCTTAAA
GAACAAGCTG CTCGCCAACG TGCTCTTGGG CGCGACGCGG GCTAA
 
Protein sequence
MTSERPSISV FFPAYNDAGT IGSLVITAFH VLPELTDDYE VIVVNDGSSD YTAQVLDDLA 
TKYPRFRPIH HPKNRGYGGA LRTGFASATK DLVFYTDGDA QYDPNELRDL YQVLTPEVDI
VNGYKIARSD PLHRKIIGRI YHHGVKFLFG FKLRDVDCDF RLIRRKVFDV VNLESDSGTI
CLELVKKLQD AGFNFAEVPV HHYHRTYGKS QFFNFPRLWR TLIQLLQLWW KLVILGKHLK
EQAARQRALG RDAG