Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3900 |
Symbol | |
ID | 5735761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4892256 |
End bp | 4893020 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641281051 |
Product | glycosyl transferase family protein |
Protein accession | YP_001546662 |
Protein GI | 159900415 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCG AACGTCCAAG TATTTCGGTC TTCTTCCCTG CCTATAATGA TGCTGGCACC ATTGGTAGCT TGGTGATTAC AGCATTTCAC GTTTTACCCG AACTCACCGA TGATTATGAA GTGATCGTGG TTAACGATGG TAGCAGCGAT TATACCGCGC AAGTGCTTGA TGATTTAGCC ACCAAATATC CACGTTTCCG CCCAATTCAC CACCCCAAAA ACCGCGGTTA TGGCGGAGCG TTACGCACAG GCTTTGCCTC GGCAACCAAA GATCTGGTGT TTTATACCGA TGGCGATGCC CAATACGACC CCAACGAGTT GCGCGATTTG TATCAAGTGC TGACCCCTGA GGTTGATATT GTCAACGGCT ATAAGATTGC CCGTTCTGAT CCATTGCATC GTAAAATTAT TGGCCGCATA TATCACCATG GAGTCAAATT TTTATTTGGC TTTAAATTAC GTGATGTTGA TTGTGATTTT CGGCTGATTC GCCGCAAAGT ATTCGATGTA GTCAATCTTG AATCCGATAG CGGCACAATC TGCTTAGAAT TGGTCAAAAA ATTACAAGAT GCTGGGTTTA ATTTTGCTGA AGTGCCAGTC CATCACTATC ATCGCACCTA TGGCAAATCG CAGTTTTTCA ATTTCCCCCG TTTGTGGCGC ACGCTGATTC AGTTGTTGCA GCTTTGGTGG AAGTTGGTCA TCCTTGGCAA ACATCTTAAA GAACAAGCTG CTCGCCAACG TGCTCTTGGG CGCGACGCGG GCTAA
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Protein sequence | MTSERPSISV FFPAYNDAGT IGSLVITAFH VLPELTDDYE VIVVNDGSSD YTAQVLDDLA TKYPRFRPIH HPKNRGYGGA LRTGFASATK DLVFYTDGDA QYDPNELRDL YQVLTPEVDI VNGYKIARSD PLHRKIIGRI YHHGVKFLFG FKLRDVDCDF RLIRRKVFDV VNLESDSGTI CLELVKKLQD AGFNFAEVPV HHYHRTYGKS QFFNFPRLWR TLIQLLQLWW KLVILGKHLK EQAARQRALG RDAG
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