Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3896 |
Symbol | |
ID | 5735757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4888276 |
End bp | 4889067 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641281047 |
Product | periplasmic binding protein |
Protein accession | YP_001546658 |
Protein GI | 159900411 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00316656 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGGTACA ACTCTTTGTT TGACATAACC GATGATCTAG GGCGTTTGCT GCACTTTGAG CATGTGCCAC AACGAATTGT TTCGTTGGTG CCAAGCTTGA CCGAGTATCT ATTTTGGTTG GGCTTGGCCG AGCAAATTGT GGGCATCACT GATTATTGTA TTGTGCCTGC TGAACAAGTG GCAGCAGTGT CCAAAGTGCG CGGAACCAAA AATCCCAATC GTGAGCAAAT TATTGGGCTG GCTCCAGATT TGATTATCGC CAATAAGGAA GAAAATCGCC AGCGTGATAT TGCAGCGCTC GAAGCAGCAG GCCTAACGAT TTATGTGAGC GATATTGAAA GCGTGCAGCA AGCAATGCTT AGCTTGGCCA AATTGGCGGG CATCGTTGGA CGAGCCGAAC AAGCTGATTC GTTGATTGCG GCGATTCAGG CTGAACTTAC GCGGAAGCCA ACCACCCAAC AACGGGTAGC CACAGCAATT TGGCGCGACC CTTGGATGTG GGTTGGCCAA GCGACCTATG CCGCCGATTT ATTGGCATGC TGCGGGGCTA GCAATTGTTT GGCTGATCCA ACGGGGCGCT ATCCACGTTT GGAGTTGGCA GAGATTGCGG CCTTGCAACC AGATTGCATT TTACTGCCCG ATGAACCCTA TGCATTTAGC CAAGCCGATG CTGACGAATT GCAAGGCTTG GCGGCACAAA TTACGTGCTG CGATGGCCAG TTATTGACCT GGTATGGCCC GCGCATTCCC CTTGCCTTGC AAACCTATCG GCGTTTGTTG CAAGCTAAGT AA
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Protein sequence | MWYNSLFDIT DDLGRLLHFE HVPQRIVSLV PSLTEYLFWL GLAEQIVGIT DYCIVPAEQV AAVSKVRGTK NPNREQIIGL APDLIIANKE ENRQRDIAAL EAAGLTIYVS DIESVQQAML SLAKLAGIVG RAEQADSLIA AIQAELTRKP TTQQRVATAI WRDPWMWVGQ ATYAADLLAC CGASNCLADP TGRYPRLELA EIAALQPDCI LLPDEPYAFS QADADELQGL AAQITCCDGQ LLTWYGPRIP LALQTYRRLL QAK
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