Gene Haur_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3896 
Symbol 
ID5735757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4888276 
End bp4889067 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content51% 
IMG OID641281047 
Productperiplasmic binding protein 
Protein accessionYP_001546658 
Protein GI159900411 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00316656 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGGTACA ACTCTTTGTT TGACATAACC GATGATCTAG GGCGTTTGCT GCACTTTGAG 
CATGTGCCAC AACGAATTGT TTCGTTGGTG CCAAGCTTGA CCGAGTATCT ATTTTGGTTG
GGCTTGGCCG AGCAAATTGT GGGCATCACT GATTATTGTA TTGTGCCTGC TGAACAAGTG
GCAGCAGTGT CCAAAGTGCG CGGAACCAAA AATCCCAATC GTGAGCAAAT TATTGGGCTG
GCTCCAGATT TGATTATCGC CAATAAGGAA GAAAATCGCC AGCGTGATAT TGCAGCGCTC
GAAGCAGCAG GCCTAACGAT TTATGTGAGC GATATTGAAA GCGTGCAGCA AGCAATGCTT
AGCTTGGCCA AATTGGCGGG CATCGTTGGA CGAGCCGAAC AAGCTGATTC GTTGATTGCG
GCGATTCAGG CTGAACTTAC GCGGAAGCCA ACCACCCAAC AACGGGTAGC CACAGCAATT
TGGCGCGACC CTTGGATGTG GGTTGGCCAA GCGACCTATG CCGCCGATTT ATTGGCATGC
TGCGGGGCTA GCAATTGTTT GGCTGATCCA ACGGGGCGCT ATCCACGTTT GGAGTTGGCA
GAGATTGCGG CCTTGCAACC AGATTGCATT TTACTGCCCG ATGAACCCTA TGCATTTAGC
CAAGCCGATG CTGACGAATT GCAAGGCTTG GCGGCACAAA TTACGTGCTG CGATGGCCAG
TTATTGACCT GGTATGGCCC GCGCATTCCC CTTGCCTTGC AAACCTATCG GCGTTTGTTG
CAAGCTAAGT AA
 
Protein sequence
MWYNSLFDIT DDLGRLLHFE HVPQRIVSLV PSLTEYLFWL GLAEQIVGIT DYCIVPAEQV 
AAVSKVRGTK NPNREQIIGL APDLIIANKE ENRQRDIAAL EAAGLTIYVS DIESVQQAML
SLAKLAGIVG RAEQADSLIA AIQAELTRKP TTQQRVATAI WRDPWMWVGQ ATYAADLLAC
CGASNCLADP TGRYPRLELA EIAALQPDCI LLPDEPYAFS QADADELQGL AAQITCCDGQ
LLTWYGPRIP LALQTYRRLL QAK