| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3895 |
|---|
| Symbol | |
|---|
| ID | 5735756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 4887910 |
|---|
| End bp | 4888272 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641281046 |
|---|
| Product | HxlR family transcriptional regulator |
|---|
| Protein accession | YP_001546657 |
|---|
| Protein GI | 159900410 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000755308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCACA ATTTTGAATC AGGCTATTCA TGCCCAGTTG AGGCGACAAT TGCGGTAATT
GGTGGTAAGT GGAAGTGTGT GATTTTGTTT CATCTCTGCG ATGGCAAGAA ACGGTTTAGC
CAATTGCAGC GCTTCTTACC ATCAATTACG CAGCGCATGT TAACCCTACA ATTGCGTGAA
CTTGAGGCCG ATGGGGTAAT TACGCGCACG GTCTACCCCG AAGTGCCACC ACGAGTCGAA
TATGCGCTGA CCGATTTTGG CGAAAGTTTG CGGCCAATTT TGTTTTTGAT GCGTGATTGG
GGTCAGGAAT ATCGCGAGGC GGTTGCCACG ACCAAAGCGC GGCAAGCAAC TCTCGCTAAT
TAA
|
|---|
| Protein sequence | MCHNFESGYS CPVEATIAVI GGKWKCVILF HLCDGKKRFS QLQRFLPSIT QRMLTLQLRE
LEADGVITRT VYPEVPPRVE YALTDFGESL RPILFLMRDW GQEYREAVAT TKARQATLAN
|
|---|
| |