| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3880 |
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| Symbol | |
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| ID | 5735729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4872013 |
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| End bp | 4874346 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641281031 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001546642 |
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| Protein GI | 159900395 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTGAAC AACAAGTTCA TAGCGTAACT GTCGAGCTGG CGGGTCGCCC GTTAACAATT
GAAGCAGGTC GGGTTGCGCA GTTGGCCAAT GGAGCAGTTT TGGTGCGATA TGGCGATACC
GTTTTGCTCG CCGCTGTCAC CGCGTCAGCC GAACCACGCG ATGGGATTGA TTTTTTCCCA
CTGACGGTTG ACTATGAAGA AAAGATGTAT GCCGCAGGTA AAATCCCCGG TTCGTTCTTC
AAACGTGAAG GCCGCCCAAC CGAAACTGCT ATTTTAACCT CGCGCTTGAC TGACCGTCCA
TTGCGACCTT TGTTTCCCAA AGGTTATTAC AATGACGTGC AGGTCTCGAT TACGACGCTT
TCAACCGATC AAGTTAATGA TCCTGGGCCG TTGGCAATTA TTGGTGCTTC GGCAGCCTTG
GTGATTTCCG ATATTCCGTT TGCTGCGCCA GTTGGTGCGG TGCAAATGGG TCATATCGAT
GGCGTTTTTG CAGTCAACCC AGTTATGGGC TTGATGGAAA ATAGCCGCCT CGATTTGGTG
GTTGCTGGTA CCAGCGAAGC CGTAATGATG GTCGAAGCGA GCGCCTACGA ATTGACCGAA
GCTGAAATGC TCGAAGCGGT CAAACGCGGC CACGAAGCCA TGCAAGCGGT GATTCAAGCC
CAACTTGAGT TGGCCGAAAA ATGTGGCAAG CCCAAAAAAG AATTTGTGGC TCCGGTCGTC
GATACTAGCC TCCAAGACGA AATCAAAGCT TGGATGGGCA ATCGCTTCTT GCAAGCCTTG
AACAATAGCG ATAAAGCTGC CCGTGAAGCT GCTACCGATA GCTTGCGCAC CGATGTGTTG
GAGCAATTCA GCGCTGGTGT AGCTGAAGAA GAATTGGCCG CTCGGGTCAA GGCAGTAACG
AAAAACTACG ATGCCTTGGT CAAAGATGAA GTTCGTGCTT CGATTCTTGA GCAAGGGATT
CGCGTCGATG GCCGCAAGGT CAACGAAATT CGGCCTATTG CGGTCGATGT TGGGGTTTTG
CCACGCGTTC ACGGCTCGGG CTTGTTTACC CGTGGTCAAA CCCAAGTGCT CACTGTAGCA
ACGCTTGGAT CGCCTGGCGA TGAGCAACGG CTCGACGATT TGGGCATCGA AACCACCCGT
CACTACATGC ACCACTACAA CTTCCCAGCC TTCTCGACTG GCGAAGCTCG CCCTTCACGC
GGCCCACGTC GCCGTGATAT TGGCCATGGC AAGTTGGCCG AACGCGCTTT GGTACCAGTC
CTGCCTGAAA AAGACAAGTT CCCCTACACC ATGCGCTTGG TCTCGGAAGT CTTGGCCTCG
AACGGTTCAT CGTCAATGGC TTCGGTGTGT GGTTCATCGC TGGCCTTGAT GGATGCTGGT
GTGCCAATCA AAGCTCCAGT TGCTGGCGTG GCAATGGGCT TGATCACTGG CAAAGAAGCT
GGTCAGTTCA GCGTTTTGAC CGACATCCAA GGCTTGGAAG ATGCTTTGGG CGATATGGAC
TTCAAGGTTG CTGGCACGAC CGCTGGCATC ACCGCGCTGC AAATGGATAT CAAAACCACG
GGCATTACCT ATGAAATTAT GCAGCAAGCA TTTGAGCAAG CTCGCCAAGG GCGTGTGTTC
ATTCTCGATA AGATGAACGA AATTATCAAC ACTGCCCGCA ACGATATTTC CCAATTTGCG
CCACGGATTA TCACCCTGCA AATCGATCCA TCGAAGATTG GGGCATTGAT TGGGCCTGGT
GGTAAGACGA TTCGCTCGAT TATCGAGCAA ACTGGTGCTC AAATTGATGT TGAGGATGAT
GGCCGCGTAT TCGTGACCAC GCCCGATGCC GATGGCGCAC GCATGGCTCA ATCGTTGATC
GAAGGCTTGA CCCGCGAAGC CAAAGTTGGC GAAATCTTTA CTGGTAAAGT TGTGCGGATT
ATGCCGTATG GCGCGTTCGT CAACGTGTTG CCAGGCAAAG ACGGCATGGT TCACGTTTCC
GAGCTTGATG AAAAGCGGGT CGAAAACGTT GAAGATGTGG TCAAAATTGG CGACGAATTG
ACCGTGATGG TGATCGATGT TGAGCCAGGC ACTGGCAAAT TGAGCCTTTC ACGTCGCGCA
ATTCTGACTG GCGAAACCGC TGAGCAACGC AAGAGCAGCA GTAGCAAAGG CGGCCCTCGC
GGTGGCGGTG GTGGCGGCGA CCGTGGCCCA CGCCCAGGTG GCGATCGTGG CCCACGCCCT
GAAGGTGATC GCGGCCCACG CCCCGAAGGT GACCGCCCAC GTGAAGGCGG CGACCGTGGC
CCACGCCCAG GTAACGGTGG CAATGACCGC CGTGGTGGTG GCTTCCGCGG CTAA
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| Protein sequence | MSEQQVHSVT VELAGRPLTI EAGRVAQLAN GAVLVRYGDT VLLAAVTASA EPRDGIDFFP
LTVDYEEKMY AAGKIPGSFF KREGRPTETA ILTSRLTDRP LRPLFPKGYY NDVQVSITTL
STDQVNDPGP LAIIGASAAL VISDIPFAAP VGAVQMGHID GVFAVNPVMG LMENSRLDLV
VAGTSEAVMM VEASAYELTE AEMLEAVKRG HEAMQAVIQA QLELAEKCGK PKKEFVAPVV
DTSLQDEIKA WMGNRFLQAL NNSDKAAREA ATDSLRTDVL EQFSAGVAEE ELAARVKAVT
KNYDALVKDE VRASILEQGI RVDGRKVNEI RPIAVDVGVL PRVHGSGLFT RGQTQVLTVA
TLGSPGDEQR LDDLGIETTR HYMHHYNFPA FSTGEARPSR GPRRRDIGHG KLAERALVPV
LPEKDKFPYT MRLVSEVLAS NGSSSMASVC GSSLALMDAG VPIKAPVAGV AMGLITGKEA
GQFSVLTDIQ GLEDALGDMD FKVAGTTAGI TALQMDIKTT GITYEIMQQA FEQARQGRVF
ILDKMNEIIN TARNDISQFA PRIITLQIDP SKIGALIGPG GKTIRSIIEQ TGAQIDVEDD
GRVFVTTPDA DGARMAQSLI EGLTREAKVG EIFTGKVVRI MPYGAFVNVL PGKDGMVHVS
ELDEKRVENV EDVVKIGDEL TVMVIDVEPG TGKLSLSRRA ILTGETAEQR KSSSSKGGPR
GGGGGGDRGP RPGGDRGPRP EGDRGPRPEG DRPREGGDRG PRPGNGGNDR RGGGFRG
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