Gene Haur_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3878 
Symbol 
ID5735727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4870011 
End bp4870433 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content56% 
IMG OID641281029 
Producthypothetical protein 
Protein accessionYP_001546640 
Protein GI159900393 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTGGC TGTATCTCAG TTTATTCGGG GTGAGTTTTT TGGCGGCCAC AGTCTTGCCA 
CTTGGCTCAG AGGCGGCCTT AGCGGCAATG GTCGTTCACG CCGAATCGCT ATGGTTGCCA
TTGGTAATTG CCACCTTGGG TAATGTGCTT GGCTCGGCTA CGACTTTTTG GCTTGGGCAA
CGAGCACGGA CAGCCATCGA TCATCGAAAT CGCAAAATTG CTGAGCGCAT GCAACGGGCT
GAGCGTTGGC TGGGGCGTTG GGGTACGCCA GCCTTGATTT TGGCTTGGTT GCCAGTGATT
GGTGATGTGT TGGTTGGGGT AGCCGGAGCC TTGGGCATGC CATGGTTGCC CAGTTTGGCT
TGGATTACGC TAGGCAAGGC GTTGCGCTAT GCAGCGATCG GCGCGGCGGT GCTATGGGTT
TAA
 
Protein sequence
MIWLYLSLFG VSFLAATVLP LGSEAALAAM VVHAESLWLP LVIATLGNVL GSATTFWLGQ 
RARTAIDHRN RKIAERMQRA ERWLGRWGTP ALILAWLPVI GDVLVGVAGA LGMPWLPSLA
WITLGKALRY AAIGAAVLWV