Gene Haur_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3872 
Symbol 
ID5735721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4865864 
End bp4866496 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content57% 
IMG OID641281023 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001546634 
Protein GI159900387 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACCAG TAATTATTGT TGGCACTGGC GGCCATGCGC GTGAGGTAGC TGAAATTGTG 
CAAGCCCAAC ATGCGGCTGG TAAAGGCGGC CCATTACGTG GCATGCTTAC CGACGACGTT
GCGCAGCATG GTACAAGCAT TTTCGGTATT CGGGTGTTGG GGCCAATCGA TTGGCTGACC
ACCCGTTTGG CTCAAGTGCA TGTCGTGGTT GCGATTGGTG ATAATGCCAC TCGCCAGCGC
ATCGCCCACC AATTTGGCGC AGAGTTACAA GCGACCAGCG CAATCTCGCC TCATGCGCTG
GTTTCGCCGC ATGCCACGAT TGGCGCAGGC GCAATGATTT TCCCCAATGC TGTGGTTGGG
CCGCTTGCCG TCATTGGCGA ATATAGTATC GTGAATGTTG GGGCGAGCGT TAGCCACGAT
AGCGTTGTGG CAGCATTTTG CAATCTCAAC CCTGGCTCGC GAGTTGCTGG CACCTGCCAG
ATTGGCGAAG GCGTTTCGCT CGGAATGGGC GCACAGGTTA TTCAAGGCCG TAGCATCGGG
GCATGGACGG TGGTTGGGGC GGGCGCGGTG GTTATTCGCG ATTTGCCCAG CCAAGCAAAG
GCAGTTGGTG TGCCAACCCG TTTGTTGGGT TGA
 
Protein sequence
MRPVIIVGTG GHAREVAEIV QAQHAAGKGG PLRGMLTDDV AQHGTSIFGI RVLGPIDWLT 
TRLAQVHVVV AIGDNATRQR IAHQFGAELQ ATSAISPHAL VSPHATIGAG AMIFPNAVVG
PLAVIGEYSI VNVGASVSHD SVVAAFCNLN PGSRVAGTCQ IGEGVSLGMG AQVIQGRSIG
AWTVVGAGAV VIRDLPSQAK AVGVPTRLLG