| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3865 |
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| Symbol | |
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| ID | 5735744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4852468 |
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| End bp | 4856001 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641281016 |
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| Product | NHL repeat-containing protein |
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| Protein accession | YP_001546627 |
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| Protein GI | 159900380 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4745] Predicted membrane-bound mannosyltransferase |
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| TIGRFAM ID | [TIGR03663] conserved hypothetical protein TIGR03663 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAC CTGACTTAAC CAAAAAGCGT CTGCGTCGCG CTCAGCCAAT TCAAGTGCGC
CGTCGGCAGA GTTCATCATG GTTAGATCGT TCGATTGCAT TTAGCTGGCT GAATAGCGAG
CTAATTGGCT ATGTTGTGCT GATTGCGCTG AGTGTGTTTA TGCACTTGTG GCAATTGGGC
AATATGGCCA TGCACCACGA TGAATCGATC CATGCCAAAT ATAGCTGGCA GTTTTATATG
GGCAAAGGTG GCTTCCAATG TGGCCTGAAC AATGCCTCAT CGGATACCTA CTGCTATAAC
CCAGTTTTTC ACGGCCCAAC CCTGTATCTC AGTACCTATC TGAGCTACTT TTTATTTGGG
GCGAGCGATG CCACCGCCCG TTTACCAATG GCCGTGGCTG GCATTGCTTT GGTCGCCTCA
TGTTGGATGT TGCGGCCATT AATTGGTAAA CGTGCTGCGT TGTTGAGCGC TGGCTTGATG
GTGCTCTCAC CAACCTTGCT CTACTTTACG CGCTTTGCCC GCCACGATGC CTTGGCAATT
CTGTTCACCT TTTGGTTGAT GGTCGGCTTG TTTCGCTTTT GGCAATCGGG CCGTGGTCGC
TGGCTCAATT TGGCTATGGC CAGTTTGGCG TTGCTCTGGG CAACTCATGA GCTAGTCTTT
ATTATTGGCT TTATTATCAT CAGCTTCTTG GTGCAGCGCT TACTATGGGA AGCGTTTGGC
TCGAAAAAAT TCGTGATTGT CTCAGGCGTT TTGATGGCAA TTACTGGGAT CTTGATGATC
TTCCAGCCGC ACGTGTCGCT ACCAACCGCC ACCAATCAAG AAGCCAATGA GCTGAATTTT
GGTGGTTTGG GCTTGATTGG GTTTTCGACC TTGCTCTTTG GGCAATTAAT TAGCCTGCGT
TGGAGTGAAG CCCCACTATT TCGCCAAGGC CTGCGCTATG TGACCAAACG GGTGTTTTGG
CAAGCCTTTG CGGCCTTTGC AGTAACCTTT ATTGTGCTGT TCAGCACCTT CTTCACCTAC
CCGCGTGGGG TGGTCGATGG CCTGTTTGCT GGAATTAGCT ATTGGTTTGG CACACAGCAG
ACCTATGCTC GTGGCGACCA GCCATGGTTC TACTATTTCA TGCAATTGGG TATTTACGAA
TTATTGCCAG TCAGCTTGAC CTTGGTTGGC TTAGGTGGTT GGCTGGCCAA AATTGGCTGG
CGCAAGGCCG TTACCAATTC CAGTTTATGG GATGATGAAA CCAGCGCTGA AACCCCGAAA
TCTGCTGATG CTGACGCTAC AAGTGCTCAG CCCGAAGCCC AAGCTGAACC TGTGGTTGTC
ACGATTGAGC CAATTGTTGA TGGTGTTCCG ATCGGCGAAA ATCCAGTTGT GGTTGCTGGT
CAAACCTCAT ATATGGCCCA AGCTGTAGCC GAAGCCAAGT CTAGCGAACC TACATTCGAA
GAAACGGTGC CAGCAATTTG GTTGGGCTTT TTGTTCTATT GGTTCTTGAT GGCATTAACC
CTGTTTTCGT GGGCTGGCGA GAAAATGCCC TGGTTGACGA TTCACATGAC CCTGCCCGCC
GTTTTGGCAG GAGCATGGGC ACTCGATAAA ATCGTTGAGC GCACCAATTG GGCCGAAACC
AAACGCACAA TTGCCTGGTT GGCAATTCCC TTGGGCAGCA TCGCCTTTGC CCTGATTATT
GCGATTATGG GTTCGATTGG GGCTTCAACC GGAGCCAGCC AACAGGTTAT GACCACCCGC
GTCAGTGCCT TCTTGCTGGT CGTGTTGTTG CTGATCGTTG GGGTATTGCT GTGGATGTTG
GTGCAACGCG CCCGCTTGCG AATCATCGCG GCCTTTGCAA CCTTGGGTAT TTTGGCACTT
TTGGGGGTTT ATAGCCTGCG CTCAAGCGTG GTTGCAGCCT ATATTCAACC TGATGTGCCC
GTGGAATTTT TGGTCTATAC CCAAACCGCC CCTGACATGC CAGTGATTGT GCGTGAAGCT
GAGCGCTTGG CAATTAGCCA AACTCGCAAC AGCCGCTCAA TCGAAGATCC AACTGGCGGC
CACACCATGA AAATTCTGAT TAGCTCAGGC GATGATTCAA GCCCAAGCCG TGAAGGTGGC
CTGAATCAAC CGCTCGATTG GTATTTCCGC GATTGGACAA ACATTCAGTG GGTCAGCAAG
AGCCAAATCG CTACACTTGA TCAAAGTATG CTCGATGCTC CAATGGCGAT CTTCTCGAAA
TCGAATTTAG CTGCTGATAC GACCCAACGC ATGGAGCAAG CAGGCTATGT GCAGCTCTAC
GATACCTATC ATAATTGGTG GTTCCCCGAA GGCAGCAGCG ACGGCTTATC AAGCTATAAA
GAAAAACTCT ACGATCCGGC CTATGGCTGC GATCCCGCGC TCAAAGGTCA GCAAGATATC
AATGGGCGCT CAAAATTCAA CTGTACTTTG GGCGGCGCAT TCATTCTGAC ATGGCCGTTG
CGCCCATCAA ATTGGGTCGC ATTGCGTGAG TATATGCTCT CGCGCGAGTT GCCCGATACG
GTTTCATTGA ATGGTCGCGA GATTGTGGTT TACGTCAAGC GCGATTTGGC CAGCTTGCCA
GTTGGCGAAG GTGGTGCAGT TAGCGGCACA GGCAGCACGC TCAAACTGGT TTCCGAAGGC
CAATTGTTGG GCGACGAACC AGCCGAACCA CGGGGCATTG CAACTGGCCC CGATGGCTCG
GTTTATATCG CCGATGCCCC GAATAATCGG ATTTTGGTCT ATCAAACCGA TAGCCAAACC
CGCATTATCA GCGGCACGAA CACTGGCGCA TTGCTCGAAC CATCGGGCGT TGCGGTCGAT
GAACAGGGCT TCGTCTATGT TGCTGATACC TGGAATGCCC GCATTGCCAA GTTCAACCCT
CAAGGCAATT TCGTCACCAG TTGGGGTAGC GGCAGCGAAG AATTACAACC TGGTTCAGGC
AAGCGTTTGA CCCGCACTGG CGGCACAACT GAGGGCAATA GCGCCAATCC ACTGGGCTTC
TTTGGCCCGC GCAACTTGGT AGTCAGTGCT GGCCGCGTCT ATATCGCCGA CACTGGCAAC
AAACGGGTGG TTGTCACCGA TACTGATGGC AATTATCTAG GCCAAGTTGG CACTGCTGGC
GCAGGCATCG GTCAATTCAA CGAGCCAATT GGCTTGGGCA TTGCCAACAA CAATTTATAT
GTTGGCGATA CTTGGAATGG CCGAATTCAG GTGTTCCCAC TTGATGCCAA TGGCGTGCCA
CAAGGCGTAC CAAGCGTGCA ATGGCCAGTT GCTGGCTGGC AAACCGATAC CTACCTCGAC
CCATTTATTG CGGTTGATAG CCAAGGTCGG GTGGCGGCGG CTATTCCGAG CAAAAACCAA
GTTGCGTTGT ATGGAGCAAC TGGCCAATTG CTGCTGGTTT GGGGTGGCCA AGGCAACGAC
GATGCCTCAA CTGGCCAACC CAGCGGTATG GCCTTCGCCC CTGATGGCAG CGTCTATGTC
AGCGAAAAAG CCAATCGTCG GATTCAACGC TGGGTTCTGC CCAAAGTTCG CTAA
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| Protein sequence | MTTPDLTKKR LRRAQPIQVR RRQSSSWLDR SIAFSWLNSE LIGYVVLIAL SVFMHLWQLG
NMAMHHDESI HAKYSWQFYM GKGGFQCGLN NASSDTYCYN PVFHGPTLYL STYLSYFLFG
ASDATARLPM AVAGIALVAS CWMLRPLIGK RAALLSAGLM VLSPTLLYFT RFARHDALAI
LFTFWLMVGL FRFWQSGRGR WLNLAMASLA LLWATHELVF IIGFIIISFL VQRLLWEAFG
SKKFVIVSGV LMAITGILMI FQPHVSLPTA TNQEANELNF GGLGLIGFST LLFGQLISLR
WSEAPLFRQG LRYVTKRVFW QAFAAFAVTF IVLFSTFFTY PRGVVDGLFA GISYWFGTQQ
TYARGDQPWF YYFMQLGIYE LLPVSLTLVG LGGWLAKIGW RKAVTNSSLW DDETSAETPK
SADADATSAQ PEAQAEPVVV TIEPIVDGVP IGENPVVVAG QTSYMAQAVA EAKSSEPTFE
ETVPAIWLGF LFYWFLMALT LFSWAGEKMP WLTIHMTLPA VLAGAWALDK IVERTNWAET
KRTIAWLAIP LGSIAFALII AIMGSIGAST GASQQVMTTR VSAFLLVVLL LIVGVLLWML
VQRARLRIIA AFATLGILAL LGVYSLRSSV VAAYIQPDVP VEFLVYTQTA PDMPVIVREA
ERLAISQTRN SRSIEDPTGG HTMKILISSG DDSSPSREGG LNQPLDWYFR DWTNIQWVSK
SQIATLDQSM LDAPMAIFSK SNLAADTTQR MEQAGYVQLY DTYHNWWFPE GSSDGLSSYK
EKLYDPAYGC DPALKGQQDI NGRSKFNCTL GGAFILTWPL RPSNWVALRE YMLSRELPDT
VSLNGREIVV YVKRDLASLP VGEGGAVSGT GSTLKLVSEG QLLGDEPAEP RGIATGPDGS
VYIADAPNNR ILVYQTDSQT RIISGTNTGA LLEPSGVAVD EQGFVYVADT WNARIAKFNP
QGNFVTSWGS GSEELQPGSG KRLTRTGGTT EGNSANPLGF FGPRNLVVSA GRVYIADTGN
KRVVVTDTDG NYLGQVGTAG AGIGQFNEPI GLGIANNNLY VGDTWNGRIQ VFPLDANGVP
QGVPSVQWPV AGWQTDTYLD PFIAVDSQGR VAAAIPSKNQ VALYGATGQL LLVWGGQGND
DASTGQPSGM AFAPDGSVYV SEKANRRIQR WVLPKVR
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