Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3865 |
Symbol | |
ID | 5735744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4852468 |
End bp | 4856001 |
Gene Length | 3534 bp |
Protein Length | 1177 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641281016 |
Product | NHL repeat-containing protein |
Protein accession | YP_001546627 |
Protein GI | 159900380 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4745] Predicted membrane-bound mannosyltransferase |
TIGRFAM ID | [TIGR03663] conserved hypothetical protein TIGR03663 |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCACAC CTGACTTAAC CAAAAAGCGT CTGCGTCGCG CTCAGCCAAT TCAAGTGCGC CGTCGGCAGA GTTCATCATG GTTAGATCGT TCGATTGCAT TTAGCTGGCT GAATAGCGAG CTAATTGGCT ATGTTGTGCT GATTGCGCTG AGTGTGTTTA TGCACTTGTG GCAATTGGGC AATATGGCCA TGCACCACGA TGAATCGATC CATGCCAAAT ATAGCTGGCA GTTTTATATG GGCAAAGGTG GCTTCCAATG TGGCCTGAAC AATGCCTCAT CGGATACCTA CTGCTATAAC CCAGTTTTTC ACGGCCCAAC CCTGTATCTC AGTACCTATC TGAGCTACTT TTTATTTGGG GCGAGCGATG CCACCGCCCG TTTACCAATG GCCGTGGCTG GCATTGCTTT GGTCGCCTCA TGTTGGATGT TGCGGCCATT AATTGGTAAA CGTGCTGCGT TGTTGAGCGC TGGCTTGATG GTGCTCTCAC CAACCTTGCT CTACTTTACG CGCTTTGCCC GCCACGATGC CTTGGCAATT CTGTTCACCT TTTGGTTGAT GGTCGGCTTG TTTCGCTTTT GGCAATCGGG CCGTGGTCGC TGGCTCAATT TGGCTATGGC CAGTTTGGCG TTGCTCTGGG CAACTCATGA GCTAGTCTTT ATTATTGGCT TTATTATCAT CAGCTTCTTG GTGCAGCGCT TACTATGGGA AGCGTTTGGC TCGAAAAAAT TCGTGATTGT CTCAGGCGTT TTGATGGCAA TTACTGGGAT CTTGATGATC TTCCAGCCGC ACGTGTCGCT ACCAACCGCC ACCAATCAAG AAGCCAATGA GCTGAATTTT GGTGGTTTGG GCTTGATTGG GTTTTCGACC TTGCTCTTTG GGCAATTAAT TAGCCTGCGT TGGAGTGAAG CCCCACTATT TCGCCAAGGC CTGCGCTATG TGACCAAACG GGTGTTTTGG CAAGCCTTTG CGGCCTTTGC AGTAACCTTT ATTGTGCTGT TCAGCACCTT CTTCACCTAC CCGCGTGGGG TGGTCGATGG CCTGTTTGCT GGAATTAGCT ATTGGTTTGG CACACAGCAG ACCTATGCTC GTGGCGACCA GCCATGGTTC TACTATTTCA TGCAATTGGG TATTTACGAA TTATTGCCAG TCAGCTTGAC CTTGGTTGGC TTAGGTGGTT GGCTGGCCAA AATTGGCTGG CGCAAGGCCG TTACCAATTC CAGTTTATGG GATGATGAAA CCAGCGCTGA AACCCCGAAA TCTGCTGATG CTGACGCTAC AAGTGCTCAG CCCGAAGCCC AAGCTGAACC TGTGGTTGTC ACGATTGAGC CAATTGTTGA TGGTGTTCCG ATCGGCGAAA ATCCAGTTGT GGTTGCTGGT CAAACCTCAT ATATGGCCCA AGCTGTAGCC GAAGCCAAGT CTAGCGAACC TACATTCGAA GAAACGGTGC CAGCAATTTG GTTGGGCTTT TTGTTCTATT GGTTCTTGAT GGCATTAACC CTGTTTTCGT GGGCTGGCGA GAAAATGCCC TGGTTGACGA TTCACATGAC CCTGCCCGCC GTTTTGGCAG GAGCATGGGC ACTCGATAAA ATCGTTGAGC GCACCAATTG GGCCGAAACC AAACGCACAA TTGCCTGGTT GGCAATTCCC TTGGGCAGCA TCGCCTTTGC CCTGATTATT GCGATTATGG GTTCGATTGG GGCTTCAACC GGAGCCAGCC AACAGGTTAT GACCACCCGC GTCAGTGCCT TCTTGCTGGT CGTGTTGTTG CTGATCGTTG GGGTATTGCT GTGGATGTTG GTGCAACGCG CCCGCTTGCG AATCATCGCG GCCTTTGCAA CCTTGGGTAT TTTGGCACTT TTGGGGGTTT ATAGCCTGCG CTCAAGCGTG GTTGCAGCCT ATATTCAACC TGATGTGCCC GTGGAATTTT TGGTCTATAC CCAAACCGCC CCTGACATGC CAGTGATTGT GCGTGAAGCT GAGCGCTTGG CAATTAGCCA AACTCGCAAC AGCCGCTCAA TCGAAGATCC AACTGGCGGC CACACCATGA AAATTCTGAT TAGCTCAGGC GATGATTCAA GCCCAAGCCG TGAAGGTGGC CTGAATCAAC CGCTCGATTG GTATTTCCGC GATTGGACAA ACATTCAGTG GGTCAGCAAG AGCCAAATCG CTACACTTGA TCAAAGTATG CTCGATGCTC CAATGGCGAT CTTCTCGAAA TCGAATTTAG CTGCTGATAC GACCCAACGC ATGGAGCAAG CAGGCTATGT GCAGCTCTAC GATACCTATC ATAATTGGTG GTTCCCCGAA GGCAGCAGCG ACGGCTTATC AAGCTATAAA GAAAAACTCT ACGATCCGGC CTATGGCTGC GATCCCGCGC TCAAAGGTCA GCAAGATATC AATGGGCGCT CAAAATTCAA CTGTACTTTG GGCGGCGCAT TCATTCTGAC ATGGCCGTTG CGCCCATCAA ATTGGGTCGC ATTGCGTGAG TATATGCTCT CGCGCGAGTT GCCCGATACG GTTTCATTGA ATGGTCGCGA GATTGTGGTT TACGTCAAGC GCGATTTGGC CAGCTTGCCA GTTGGCGAAG GTGGTGCAGT TAGCGGCACA GGCAGCACGC TCAAACTGGT TTCCGAAGGC CAATTGTTGG GCGACGAACC AGCCGAACCA CGGGGCATTG CAACTGGCCC CGATGGCTCG GTTTATATCG CCGATGCCCC GAATAATCGG ATTTTGGTCT ATCAAACCGA TAGCCAAACC CGCATTATCA GCGGCACGAA CACTGGCGCA TTGCTCGAAC CATCGGGCGT TGCGGTCGAT GAACAGGGCT TCGTCTATGT TGCTGATACC TGGAATGCCC GCATTGCCAA GTTCAACCCT CAAGGCAATT TCGTCACCAG TTGGGGTAGC GGCAGCGAAG AATTACAACC TGGTTCAGGC AAGCGTTTGA CCCGCACTGG CGGCACAACT GAGGGCAATA GCGCCAATCC ACTGGGCTTC TTTGGCCCGC GCAACTTGGT AGTCAGTGCT GGCCGCGTCT ATATCGCCGA CACTGGCAAC AAACGGGTGG TTGTCACCGA TACTGATGGC AATTATCTAG GCCAAGTTGG CACTGCTGGC GCAGGCATCG GTCAATTCAA CGAGCCAATT GGCTTGGGCA TTGCCAACAA CAATTTATAT GTTGGCGATA CTTGGAATGG CCGAATTCAG GTGTTCCCAC TTGATGCCAA TGGCGTGCCA CAAGGCGTAC CAAGCGTGCA ATGGCCAGTT GCTGGCTGGC AAACCGATAC CTACCTCGAC CCATTTATTG CGGTTGATAG CCAAGGTCGG GTGGCGGCGG CTATTCCGAG CAAAAACCAA GTTGCGTTGT ATGGAGCAAC TGGCCAATTG CTGCTGGTTT GGGGTGGCCA AGGCAACGAC GATGCCTCAA CTGGCCAACC CAGCGGTATG GCCTTCGCCC CTGATGGCAG CGTCTATGTC AGCGAAAAAG CCAATCGTCG GATTCAACGC TGGGTTCTGC CCAAAGTTCG CTAA
|
Protein sequence | MTTPDLTKKR LRRAQPIQVR RRQSSSWLDR SIAFSWLNSE LIGYVVLIAL SVFMHLWQLG NMAMHHDESI HAKYSWQFYM GKGGFQCGLN NASSDTYCYN PVFHGPTLYL STYLSYFLFG ASDATARLPM AVAGIALVAS CWMLRPLIGK RAALLSAGLM VLSPTLLYFT RFARHDALAI LFTFWLMVGL FRFWQSGRGR WLNLAMASLA LLWATHELVF IIGFIIISFL VQRLLWEAFG SKKFVIVSGV LMAITGILMI FQPHVSLPTA TNQEANELNF GGLGLIGFST LLFGQLISLR WSEAPLFRQG LRYVTKRVFW QAFAAFAVTF IVLFSTFFTY PRGVVDGLFA GISYWFGTQQ TYARGDQPWF YYFMQLGIYE LLPVSLTLVG LGGWLAKIGW RKAVTNSSLW DDETSAETPK SADADATSAQ PEAQAEPVVV TIEPIVDGVP IGENPVVVAG QTSYMAQAVA EAKSSEPTFE ETVPAIWLGF LFYWFLMALT LFSWAGEKMP WLTIHMTLPA VLAGAWALDK IVERTNWAET KRTIAWLAIP LGSIAFALII AIMGSIGAST GASQQVMTTR VSAFLLVVLL LIVGVLLWML VQRARLRIIA AFATLGILAL LGVYSLRSSV VAAYIQPDVP VEFLVYTQTA PDMPVIVREA ERLAISQTRN SRSIEDPTGG HTMKILISSG DDSSPSREGG LNQPLDWYFR DWTNIQWVSK SQIATLDQSM LDAPMAIFSK SNLAADTTQR MEQAGYVQLY DTYHNWWFPE GSSDGLSSYK EKLYDPAYGC DPALKGQQDI NGRSKFNCTL GGAFILTWPL RPSNWVALRE YMLSRELPDT VSLNGREIVV YVKRDLASLP VGEGGAVSGT GSTLKLVSEG QLLGDEPAEP RGIATGPDGS VYIADAPNNR ILVYQTDSQT RIISGTNTGA LLEPSGVAVD EQGFVYVADT WNARIAKFNP QGNFVTSWGS GSEELQPGSG KRLTRTGGTT EGNSANPLGF FGPRNLVVSA GRVYIADTGN KRVVVTDTDG NYLGQVGTAG AGIGQFNEPI GLGIANNNLY VGDTWNGRIQ VFPLDANGVP QGVPSVQWPV AGWQTDTYLD PFIAVDSQGR VAAAIPSKNQ VALYGATGQL LLVWGGQGND DASTGQPSGM AFAPDGSVYV SEKANRRIQR WVLPKVR
|
| |