Gene Haur_3841 details

Gene Information

• Locus tag: Haur_3841
• ID: 5735706
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: -
• Start bp: 4821508
• End bp: 4824930
• Gene Length: 3423 bp
• Protein Length: 1140 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641280994
• Product: hypothetical protein
• Protein accession: YP_001546605
• Protein GI: 159900358
• TIGRFAM ID: [TIGR01451] conserved repeat domain

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0865863
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACGGA TGCTACAGTT TTTGGCAATC GTGATGCTGG TGATCGGTGG CACTTGGCCG 
CAATTTCAGG CCAACGCAGC TCAATCAGAG CCAAATTTGC AGGCTCCCAC GGCACTCAAT 
GCGGTGGCCG ACGACCAATT TTGGAATAAC GATAATTTGG TGGCCGATGC CAATAATAAG 
ATTAATGCGA TTACAACATT GAATAACGAT CTGTTTGTTG GTGGGTTGTT TAGCCGAGTC 
GGCGGCATCG ATGCTGCACG AGTAGCCCGT TGGAATGGCG AACGTTGGTT TGCGCTAGGC 
AGTGGTATCA GCGGCGCAAA TGCCAAAATC GAGGCGATCG ATGCCTCAAC CAGCGGCAAT 
GTCTACGCTG TGGGCGAGTT CGCTAGTGCT GGCGGGGTCG CCGCTGATAG TATCGCCCGC 
TGGAATATTG CCACCCAACA ATGGTCGGCG CTAGCAACCA ATGTTAATGG CTCGGTCGAT 
GCTGTGGTGG TTGTGCCCGA TGCGAATGGC GATATTGTGT ATGTTGGCGG CAGCTTTACG 
AGCATCGATG GGGTCAGCGC CAATCGAATT GCCCGCTGGA CGAATGGCAC ATGGAGCGCC 
TTGGCTGATG GCCTAGCAGG CACAAATGCC CAAGTTTTTG CTGTAGCCTT CAATCCCAGC 
AACACGGCCC AAATTTTGGC AGGCGGGGTA TTTACCAGCG CCAATGGTTT GGTTGCCAAC 
AATATCGCCT TATGGGATGG CAATGCTTGG CAAAGCCTTG GTACTGGCAC GAACAATGGG 
GTAAATGGTC GAGTGCGCTT TGTCGATTTT CGCAGCAGCA ATTTTGTGGT GGTTGGTGGT 
AGTTTCACCA GTGCAGGCGT TGTCTTGCCA GTGGGCGGCT CGGCAGCTTG GCGCGGCGGC 
AATACGTGGG AAGCCTTCAC TGGCCGCGGC TTTAATCCAA TTGCGTCAAA TTCTGAAATT 
CGCGCAATTG CCGAATTACC TGGGCGAATC TTTGTTGGGG GCAATTATTT TGGTCTGGTG 
AACTCCAGCG GTCAGGTAAC CACGGGGAAT TTAATGGGGC TATGGAACGG CACAACCTGG 
CAGTTTATAC CAAATTCACC CTTCAAAATT AGCCAAATCG AACGGATTGG CACAACTGAA 
CAATTTTTCG TTACTGGTGA AAGTACCAAT ATACTTAATC CGAGTGGTTT TGTTAGTTTG 
TTTATTCCCA CGCCAACTGG CAGCAATCAG CCGCATCAAT TCTTGCCCTT GGGTGGCACA 
ATCAGCGGGC CGGATAATGC AGTATTTGCG GTGCATGCCA GCGCTTCAGG CGTGTTTGTC 
GGTGGCGAAT TCAACCGCGC CAGCGATCAG GCGATCAACA ATATTGCGCT GTTCAACCCA 
ACGACCCGCA CATGGTCGCC ATTATTTGGC AAAACTGAAA ATGGCACCAA TGATACCGTG 
CGGGCAATTG CGCCATTTGG CAGTGATCAA TTGATCGTTG CTGGCGATTT TAGCGAGGCT 
GGCGGAATCA ACACCGCAGG CGTGGCCAAG TGGGATATTG GTGATCAGCA ATGGTTTGAG 
ATTTCCAATA GTATCAATGG TTCGGTGCGG GCAATTGCCA TCAACGGTAG TGAAATTGTG 
ATTGGCGGCG ATTTTACCCA AATCGATGGT ACGACTGTCA ATCATATTGC CCGCAGTACC 
AACGGCGGAA ATTCATGGTC GGCGCTTGGC TCAGGCATTG GCGGGCCAGT TCATGCCTTG 
GTGTTCCGCA GCGGAACGTT ATTTGCAGGC GGTGATTTTA GCACTGCTAG CGGCGTGAGC 
GCCAATAATA TTGCCCGTTG GAATGGTACA GCCTGGCAAG CATTGCGCGG TGGCACTGAC 
GATATTGTAT TTTCGTTAGC GGCATTTGGC ACCCAGATTG CGGTTGGTGG CTCGTTCAAT 
TTAGCTGATG GCGTGGCTGG AACCAGCGCA ATCGCCCTTG TTCACCCGAC AACTGGGGTT 
TGGTCGCCGT TGGCTCAAGG CTTTGGCATT GGCAACACTG TTCAAACGCT GGCAGTGCGT 
GGCACTGATT TGTATGCAGC TGGTACGTTT TTCTACTCGC AGCCTAACCC CACTCGCCCA 
ACCAATATCG CCCGTTGGGA TGGTACTGCT TGGCAAGCAT TGGGTAGCGG AATTAGTGGC 
GGCACTGGCA ATGCCGATTC GGTCAAAGGA TTCGCAATGA GCGTGCGCGG CGATGATCTA 
TTTGTTGGTG GAATTTTTGA TGCTGCTGGC AGCAAATCAT CGAAGCGCTT TGCCCAATGG 
ACTCAGCCCG AAGTTGATTT GGCGGTCAGT CTGCGCGATT CGGCTGATCC GGTACAGGTC 
AACACCCCAT TCCAATACAA TGTGAGCTTA ATCAACCAAG GCATCATTAC CGCAACCAGC 
GTGATTTACG AGCAAACATT TGATAGCTCG GTTAGTTTTG GCAATATTAG TGCTAGCCAA 
GGCACATGTA GTTTCAGCAA TGCCACGACC TTGCGTTGTA CGCTTGGCAC GCTCACGCCC 
AATGCCCGCG CTACTGTGGT AGTCAATGCT ACGCCAACTC AAGTTAGAAC GATCACAAGC 
CGTGGCACGC TTAGTTCGCC GGCTGATGAG CCTATTACAG CCAACAATCA ACAACAAATT 
AGCACCCAAA TTATTGCTCC AGGCAACCCA GTGCCAACTA TCAGCAGCAT TACGCCCAAT 
AGTTTTGTGC AACAAGCAAT TGGCTTGCCA GTGCAAATCA GCGTCAGCGG CACGGGTTTT 
GTTGCTAGCT CCAAGGTGTT TGTTGATGGA ATTGAACGCC CAACTACCTT CTTAAATAAT 
GTTCAAATTA ATTTCTCAAT GCCAGTCAAT ACAGCACTGG GTAATCATAG CGTGATTGTG 
CGCAATCCCA CACCTGGCGG CGGCGATTCG AATAGCGTTA ATTTGGCAGT TTTGCGCAAT 
AACGTCGGAT TTAGCAGCAT CACTCCCGAT ACAGGCGGTG TAGATGTAGG TTTGCAAACC 
ACCTTCACGA TTAGCTGGAC TCACACCACC GATCCATGGC GGATTATCGA TAGCCTTGAT 
TTACGCTTGG TCAATGCCGA TGGAATTGGG TTGTGGGCAC GCTTTACTGA GGGCGTTTCG 
GGCACATTTA GTTTGCTCAA CAGCGAGGGT GATATCATCG GCACAGCGAT TGCCGAAACT 
CCAAACATCC TCAGCAGCGA CACTGCCGAG CTTGATGTTG AAGCCAGCAG TTTTGCCGGC 
AGCGGCCCAA CTGGCTTTAG CATGAATGTA ACCTTCAACG TGACCTTCAA CGAGGCGGCG 
CGTGGTCGCT ATAATATCGA ACTCTACGCC AGCGATGATC ATGGCGAGTT GCAAGGGCCA 
GATGTGCTGG GCACCTTCGA TGTTGGCATT CACCAAATCT TCCTGCCAAT GACAATTAAA 
TAA 

 

Protein sequence

MRRMLQFLAI VMLVIGGTWP QFQANAAQSE PNLQAPTALN AVADDQFWNN DNLVADANNK 
INAITTLNND LFVGGLFSRV GGIDAARVAR WNGERWFALG SGISGANAKI EAIDASTSGN 
VYAVGEFASA GGVAADSIAR WNIATQQWSA LATNVNGSVD AVVVVPDANG DIVYVGGSFT 
SIDGVSANRI ARWTNGTWSA LADGLAGTNA QVFAVAFNPS NTAQILAGGV FTSANGLVAN 
NIALWDGNAW QSLGTGTNNG VNGRVRFVDF RSSNFVVVGG SFTSAGVVLP VGGSAAWRGG 
NTWEAFTGRG FNPIASNSEI RAIAELPGRI FVGGNYFGLV NSSGQVTTGN LMGLWNGTTW 
QFIPNSPFKI SQIERIGTTE QFFVTGESTN ILNPSGFVSL FIPTPTGSNQ PHQFLPLGGT 
ISGPDNAVFA VHASASGVFV GGEFNRASDQ AINNIALFNP TTRTWSPLFG KTENGTNDTV 
RAIAPFGSDQ LIVAGDFSEA GGINTAGVAK WDIGDQQWFE ISNSINGSVR AIAINGSEIV 
IGGDFTQIDG TTVNHIARST NGGNSWSALG SGIGGPVHAL VFRSGTLFAG GDFSTASGVS 
ANNIARWNGT AWQALRGGTD DIVFSLAAFG TQIAVGGSFN LADGVAGTSA IALVHPTTGV 
WSPLAQGFGI GNTVQTLAVR GTDLYAAGTF FYSQPNPTRP TNIARWDGTA WQALGSGISG 
GTGNADSVKG FAMSVRGDDL FVGGIFDAAG SKSSKRFAQW TQPEVDLAVS LRDSADPVQV 
NTPFQYNVSL INQGIITATS VIYEQTFDSS VSFGNISASQ GTCSFSNATT LRCTLGTLTP 
NARATVVVNA TPTQVRTITS RGTLSSPADE PITANNQQQI STQIIAPGNP VPTISSITPN 
SFVQQAIGLP VQISVSGTGF VASSKVFVDG IERPTTFLNN VQINFSMPVN TALGNHSVIV 
RNPTPGGGDS NSVNLAVLRN NVGFSSITPD TGGVDVGLQT TFTISWTHTT DPWRIIDSLD 
LRLVNADGIG LWARFTEGVS GTFSLLNSEG DIIGTAIAET PNILSSDTAE LDVEASSFAG 
SGPTGFSMNV TFNVTFNEAA RGRYNIELYA SDDHGELQGP DVLGTFDVGI HQIFLPMTIK