Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3832 |
Symbol | |
ID | 5735697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4811911 |
End bp | 4812684 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641280985 |
Product | hypothetical protein |
Protein accession | YP_001546596 |
Protein GI | 159900349 |
COG category | [R] General function prediction only |
COG ID | [COG1811] Uncharacterized membrane protein, possible Na+ channel or pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000789065 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGA GTCTGTGGGC GAAACTCAAT GGAACGTTGA TCAATGTGGC GACGGTGGCA CTTGGCACAG GCTTAGGCTT AGCGTTACGT GGGCGTTTAC CCGAACGCAT GCAAACAGTC ATTATGCAGG CACTGGGCTT GGTGACGATC TTTATTGGCT TATCGATGGC TGGCAGCATG AACAAAGCTG GAGCAACCTT GCAAAGCACA GCCCTAGCAG CTCAGCCAAT TGTAGTCGAT GGGGTGGTGA TTGGCTTGGT TGGTTTGGTG GTTGGTGGTT TGTTGGGGGA GTGGTGGCGA GTCGAGCAGC GTTTAGCTGC ATTAGGCGAT TGGCTCAAAG CTAAATTTAA TGGGAGCGGA CGCTTTACCG AGGGCTTTGT AGCAGCTTCA TTGCTGTTTT GTATTGGCCC AATGACCTTG ATTGGTAGCA TTAACAATGG CTTGATCGGC GATTCACAGC TACTGATCAT CAAAGCGGCG CTCGATGGCT TGGCGGCAAT TGCTTTGGCT AGCAGCTTTG GGATTGGCGT GGGCTTTTCG ATTTTGATCA TTTTGATTTA TCAAGGTGGG GTGGCGCTGG CGGCTGGTGC TTTAGCCACG ATTTTGCCCA ATCCAGCGGT CGATCCACGG GTGTTGATCA TTACGGGAGT TGGGGGCTTG ATGGTGGTTG GCGTGGGCAT CAATCTGCTT GATCTGACCA AAATTCGCGT GGCTTCGTTG CTACCTGCCT TACTGGTAGC TCCGCTGTTT CATTGGCTAA TTAGCTTGCT TTAG
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Protein sequence | MDLSLWAKLN GTLINVATVA LGTGLGLALR GRLPERMQTV IMQALGLVTI FIGLSMAGSM NKAGATLQST ALAAQPIVVD GVVIGLVGLV VGGLLGEWWR VEQRLAALGD WLKAKFNGSG RFTEGFVAAS LLFCIGPMTL IGSINNGLIG DSQLLIIKAA LDGLAAIALA SSFGIGVGFS ILIILIYQGG VALAAGALAT ILPNPAVDPR VLIITGVGGL MVVGVGINLL DLTKIRVASL LPALLVAPLF HWLISLL
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