Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3804 |
Symbol | |
ID | 5735668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4774884 |
End bp | 4775687 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641280956 |
Product | ABC transporter related |
Protein accession | YP_001546568 |
Protein GI | 159900321 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.162202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAAACG TTTTGTTGAA AACTGAACAT CTTTCACGCT CGTTTGGTGG TTTGCAGGCG GTGCGTGATG TAAGCATCGC AGTTGAAGAA GGTTCGTTTC ACTCGGTTAT TGGGCCAAAT GGGGCGGGTA AAACGACCTT CTTCAACATG ATTAGTGGCG CGATTAAGCC CAGCAGCGGC AAGGTATTTT TTGCTGGTAA CGAGATTACT GGTCTGCCCT TGCACCGTAT GATTCACCTT GGCATTGGCC GCGCCTACCA AATTACCAGT TTGTTTCCCT CGCTGAGCGT GGCCGAAAAT GTGCGTTTGG CCGCTCAAGC CCGAGGCCGC GATACCTTCA AATTTTGGCA GCATAGCGAT CGGTTCGAGC GTTATCACGA ACGAGCGCAG GCTGCGCTCA AGTTGGTAGG GTTGCGCGGG GTTGAGCAGG TACTCGCCAG CGCCTTGCCA CACGGCGATA AACGCAAACT TGAATTAGCC CTGCTGCTCG CTAGTGAGCC ACGGCTATTA TTGCTCGATG AGCCAACCGC TGGCATGGCT GCCAACCAAG TGCCTGAATT GATCGAGATT ATTCAGCAAC TTCGCCAAAG CGGCCAACAT ACGATTATTC TGGTTGAGCA TCGCATGGAC GTGGTGATGA GCATTTCCGA TCAAATTACG GTGATGCATG GTGGCAGTGT GCTGGCCGAA GGCACGCCCC AAGCGATTGC CGCCGATCCA CGGGTGCAAC AAGCCTACCT CGGTGAATTG TATGATGATG TGCTAACCCA GCCTCACGAG GTCGCCCATG ACACCAATTC TTGA
|
Protein sequence | MPNVLLKTEH LSRSFGGLQA VRDVSIAVEE GSFHSVIGPN GAGKTTFFNM ISGAIKPSSG KVFFAGNEIT GLPLHRMIHL GIGRAYQITS LFPSLSVAEN VRLAAQARGR DTFKFWQHSD RFERYHERAQ AALKLVGLRG VEQVLASALP HGDKRKLELA LLLASEPRLL LLDEPTAGMA ANQVPELIEI IQQLRQSGQH TIILVEHRMD VVMSISDQIT VMHGGSVLAE GTPQAIAADP RVQQAYLGEL YDDVLTQPHE VAHDTNS
|
| |