| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3705 |
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| Symbol | |
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| ID | 5735569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4658032 |
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| End bp | 4659885 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641280857 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001546469 |
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| Protein GI | 159900222 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00647332 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTACC CAACTTGGAC AAGCGCTGTG CACCACGATG GTTCGGCGCT GTACCTTCAA
CCAAGCCAGC CCTATCACCT TGGTCAACAA GTAACTGTTC GCTTGCGAAC TCCATTAGCT
GCGCCAATTA CCCAAGCCTT TATTCGCATC TGCCCCGATG GCGAGCAAAC GTTTGTGGCG
ATGCAACCAG CCGAACGGAC TGAAACGATT CAATGGTGGC AAGGCCAAAT CACGCTCTCG
ATGCCGCGCA CTGGCTATCG CTTTTGGCTG ATGACCGAGC AAGGCGGCTG GTGGCTTTCG
GCAGCAGGCA TGCAACGTTC AACCCCTACC GATGCGACCG ATTTTAAGTT GTTGGCTGAT
TATCATGCCC CAACCTGGGT GCATTCAGCA GTGTTCTATC AAATTTTTCC TGATCGGTTT
TGTGATGGCG AGCCAAGCAA TAATGTGGTT GATGGCGAAT ATACAGTTTA TGGCAAGCCA
ACGATTGCCC GCCAATGGGG CGAGGCTCCT CAGAAAGCCA CGGGTGGTAT CGAGTTTTTC
GGTGGCGATT TACAGGGTAT TAGCCAAAAG CTTGATTATC TTGCGCAGCT AGGGATTAAT
GCGCTGTATC TCACGCCGAT TTTTACTGCT CCCTCAAACC ACAAATACGA TACCGCCGAT
TATCTGCAAA TCGATCAGCA TTTTGGCGGT GAGGCGGCTT TGGCTGAATT GCGCCAAGCA
ACCCAACGCT ACCAGATGAA ATTGATGTTG GATATTGTGC TCAATCACTG TGGCTACACT
CATCATTGGT TTACGGCGGC TCAAGCCGAT ACCAACGCGC CTACCGCTGA TTATTTTTCG
TGGAAGCAAC ATCCCAACGA GTATGAATCA TGGTTAGGTC ATCGCTCATT GCCCAAACTC
AATTACACCA GCCATGGCTT GCGCCAAGCA ATTTATGGCA GCGAACAGGC GATTGTGCGC
CATTGGTTGC GTCAACCCTA TGCGATCGAT GGCTGGCGAA TCGATGTAGC CAATATGTTG
GCCCGCCAAG GTTCGAGCCA GTTAGGGCAT AAAATTGGCC GCGCACTGCG CCGCGCCGTA
AAAGCCGAAT CACCTGAAGC CTATTTACTT GGCGAACATT TCTATGATGG CACGAATCAC
CTTCAAGGCG ATGAACTTGA TGCCAGCATG AACTATCGTG GCTTTACCTT CCCGACCTTG
CAATGGCTAG TTGGCTTCGA TATGGCCTCG GTGTGGAACC TGGTTTGGGA AGATCGGGCC
TTATTGCCGA CTGAAGCCTT GGGCGAGCAA TGGCTGGCCT TTTTGGCCGT GATTCCATGG
CAAGTCGCTT TGCAACAATT CAATTTGCTC GATTCGCACG ATACGCCACG TTTGTTGACG
ATTGTTGGTG GTGATCTGTC ATTACATCAC GTCGCAGTTA CCCTGCAAAT GACCTTCCCG
GGCGTGCCCT GCATCTATTA TGGCGATGAA GTCGGCATGC AAGGCGGCGG CGATCCCGAG
TGTCGCGGCT GTATGCCATG GGATGCACAA GTTTGGGATC ACGATCTGCT AGCTTTTTAT
CGTTCGCTGA TTGGATTACG CCGTAGTTCG AGCGCTTTGA GTGTTGGCGG ATTTCAATTA
TTGCTGGCCG AAGGCGATAC GGTGGCCTTT ATGCGGCGCA GCGCTGATGA ATGTTTGTTG
ATCGTTGCCC AGCGGGCTGC TACCAGCATT CCCCCAATTC CAATGTTCGC AACCGGATTG
ACTGATGGTA CAAGCTTTAT CAAAGTCGCT GGCACAACGA AAATTACGAT TCAGGCTGGG
GTACTAGTTT TGCCACAAAC TGGCATTAGC GCCAGCATCT GGCAAATGCA GTAG
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| Protein sequence | MHYPTWTSAV HHDGSALYLQ PSQPYHLGQQ VTVRLRTPLA APITQAFIRI CPDGEQTFVA
MQPAERTETI QWWQGQITLS MPRTGYRFWL MTEQGGWWLS AAGMQRSTPT DATDFKLLAD
YHAPTWVHSA VFYQIFPDRF CDGEPSNNVV DGEYTVYGKP TIARQWGEAP QKATGGIEFF
GGDLQGISQK LDYLAQLGIN ALYLTPIFTA PSNHKYDTAD YLQIDQHFGG EAALAELRQA
TQRYQMKLML DIVLNHCGYT HHWFTAAQAD TNAPTADYFS WKQHPNEYES WLGHRSLPKL
NYTSHGLRQA IYGSEQAIVR HWLRQPYAID GWRIDVANML ARQGSSQLGH KIGRALRRAV
KAESPEAYLL GEHFYDGTNH LQGDELDASM NYRGFTFPTL QWLVGFDMAS VWNLVWEDRA
LLPTEALGEQ WLAFLAVIPW QVALQQFNLL DSHDTPRLLT IVGGDLSLHH VAVTLQMTFP
GVPCIYYGDE VGMQGGGDPE CRGCMPWDAQ VWDHDLLAFY RSLIGLRRSS SALSVGGFQL
LLAEGDTVAF MRRSADECLL IVAQRAATSI PPIPMFATGL TDGTSFIKVA GTTKITIQAG
VLVLPQTGIS ASIWQMQ
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