Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3692 |
Symbol | |
ID | 5735541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4644463 |
End bp | 4645848 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641280844 |
Product | MATE efflux family protein |
Protein accession | YP_001546456 |
Protein GI | 159900209 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000025823 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTC CATTAGGCGC AGCACAGGGG CGAAGCAGCC AACGGAGTGC TGTATTAAAG TTGGGCTTGC CAGCAGTTGG CGAGCAATTA TTGAGTTTGA TGGTTGGGTT GGTTGATACC TATGTGGTGG GACACTTGAG CTTAGCCGTC GCAACTGCCA ATGGCTACGA TCGCCAAATC GCCTTGGCAG CGACCGGCAT TTCGAGCCAA GTCACATGGA CATTAATCAC CTTTTTTATG GCAGTAGCCC TCGGTAGCAC GGTGGTTATT GCGCGGTTTG TGGGGGCAGG CGAGCGCGAA CAAGCCAACC AAACCCTGCG CCAAGCCCTG CTAATTGGGC TAGCCATGGG CCTGCTGAGT TTATTTTTGG CCTATAGCTT TGCCCCTCAA CTGATGGATT TACTCGGCGC AAACGAGCAA GTGCGCCAAT ATGGGGCTGG CTATTTGCGT ATTTCCGCCT TATCAATGCC CTTAATGGCC ATGCTTTACG TGGGCAATGC CGCCTTACGT GGCTCCGGCG ATACGCGCAC CCCACTCAAG GTTATGCTGG TCGTCAATGG GATCAACGCA GGGTTATCGT TGCTCTTGGT CAATGGCTAT TTTGGTTTTC CGGCGATGGG GATTAATGGG GCAGCATTTG CCGCGATGAG TGGGCAAGGC ATCGGTGGCT TAATGGTGCT TGCAACACTG ATTCGTGGCC GTTCAGGCTT GAAGCTTGAT CAAATTCCAC GCCCAGATGG CAATTTGATC TGGCGGATTT TACGCCAAGG GCTGCCATAT GGGGCTGAGC AATTTATTTT TCAGGCCGCA TTATTAATTT TTATCCATTT GATCAACGAT ATTGGCACGG CGGCTTATGC TGCGCATAAC ACCATTATCA CGATTGAAAG TATTTCGTTT TTGCCAGGCA TGGGCTTGGC GGTAGCCGCC ACAACCTTAG TCGGCCAACA TATGGGAGCA AATCAGCCAC AACAAGCTAG CGAAAGTGGC TTTGAGGCAT TTCGGCTGGG AGCACTCTTC ATGGGGGCAA TTGGCTTATT GTTTGTAGTT GCGCCAGAAG TCTTTTTGCG CTTTTTCGTT GCTGACGAAG AGGTAGTGCA ACTCGCCGCC TTACCGTTGC GCATGGTTGG GTTTGCTCAG CCCGCTTTGG CCGCTAATTT CATCTTCAGC GGCAGTTTAC GTGGTGGTGG CGAGCCAAAA TGGCCACTGA TTAGCAAAAT GCTGAGTGTT TGGTGTGTCC GCTTACCGCT GGCATGGCTG CTTGTCAAGC ACTTCGACCT TGGCTTGAAT GGCATTTGGC TGGCAATGTG TACCGATTTT GCCGTCCAAG GCAGCTTGGC ATGGTGGCGC TTCCGACAAG GCAAATGGCA AAGTGCAAAA GTTTAG
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Protein sequence | MAIPLGAAQG RSSQRSAVLK LGLPAVGEQL LSLMVGLVDT YVVGHLSLAV ATANGYDRQI ALAATGISSQ VTWTLITFFM AVALGSTVVI ARFVGAGERE QANQTLRQAL LIGLAMGLLS LFLAYSFAPQ LMDLLGANEQ VRQYGAGYLR ISALSMPLMA MLYVGNAALR GSGDTRTPLK VMLVVNGINA GLSLLLVNGY FGFPAMGING AAFAAMSGQG IGGLMVLATL IRGRSGLKLD QIPRPDGNLI WRILRQGLPY GAEQFIFQAA LLIFIHLIND IGTAAYAAHN TIITIESISF LPGMGLAVAA TTLVGQHMGA NQPQQASESG FEAFRLGALF MGAIGLLFVV APEVFLRFFV ADEEVVQLAA LPLRMVGFAQ PALAANFIFS GSLRGGGEPK WPLISKMLSV WCVRLPLAWL LVKHFDLGLN GIWLAMCTDF AVQGSLAWWR FRQGKWQSAK V
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