| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3677 |
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| Symbol | |
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| ID | 5735553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4620263 |
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| End bp | 4620856 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641280826 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001546441 |
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| Protein GI | 159900194 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00549514 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATTGA TCCAGCGGCT CGTTGCGGAA CCAACGCCAT TCGATCAGCA AACTCTTGAT
GATCATCGTG ATGTGGCGTT GGCGGTGGCG GGCGATCACG AGGCCTTTTT GCGCTTATAC
CAACGCTATA TCACGCCCGT CTATCGGTTT TTGATGGCAC GCTTGCAACA GCACCACGAT
GCCGAGGAAG TCGCGGCGTT AGCCTTCGAG CGAGCTTGGC AAAGCCTTGG TCAATTCAAA
CCCAATGGGC CATTCGTCGG CTGGTTATTT ACGATTGTGC GGCGTTGTTT AGTCGATTTC
TATCGGCGCG GCCAGCATCG CCGCCAGCAA ACCCAGCTAT CGCCCGAATT GGCGAGTCAC
CAAGCTTCGC CCGAATTGAC GATGCTTGAA CTTGAGCAAC AAAGTTTGGT GCACCACGCC
TTGGCTCAAC TAACACCTGA ACAGCAAGAG TTGCTTCAAT TGCGCTTTTT TGCCCAATTG
CCTTATGCCA CAATTGCCCA AATTGTGGGC AAACGCGAGG CTGCGGTCAA AATGGCCGCC
TATCGAGCGC TTGAACAACT TAAACGGAGG CTCACCGATG ACCAATCAAT CTGA
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| Protein sequence | MALIQRLVAE PTPFDQQTLD DHRDVALAVA GDHEAFLRLY QRYITPVYRF LMARLQQHHD
AEEVAALAFE RAWQSLGQFK PNGPFVGWLF TIVRRCLVDF YRRGQHRRQQ TQLSPELASH
QASPELTMLE LEQQSLVHHA LAQLTPEQQE LLQLRFFAQL PYATIAQIVG KREAAVKMAA
YRALEQLKRR LTDDQSI
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