| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3659 |
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| Symbol | |
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| ID | 5735520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4599898 |
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| End bp | 4601037 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641280808 |
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| Product | multiple sugar-binding periplasmic receptor ChvE precursor |
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| Protein accession | YP_001546423 |
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| Protein GI | 159900176 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGA AGTCTCCTCG CGCGAAGTTC ATGATGGTTT TGATGTTGCT CATGACAATG
GTTTTGGCCA GCTGTGGCGA AGCCGCAACT CCAACCACTG CGCCAACCGA TGGCGGCACT
GGTGGCACAA CCGCCAGCAG CGATAACAGC AAATTCACCA TTGGGATCTC AATGCCCACC
AAATCATCAG CCCGCTGGAT TGCCGACGGC GATAATATGG TGAAATATTT CCAAGAAAAA
GGCTTCAAAA CCGACCTTCA ATACGCTGAA GACGATATCC CAACCCAACT TTCACAAATT
GAAAACATGG TCACCAAAGG GGTCAATGTT TTGGTGATTG CGGCAATCGA TGGCGAAACC
CTCTCAGATG TTCTGCAAAG TGCTAAAGAC AAGAAAATTC TGGTTATCGC CTACGACCGC
TTGATCAAGA AAACCCCCAA CGTTGACTAC TACGCCACCT TCGATAACTT CCAAGTTGGG
GTCTTGCAAG CCCAATCAAT CGAAACCAAA CTTGGTTTGA AAGAAGGCAA AGGCCCATTC
AATATCGAGT TGTTCGGTGG CTCATCCGAC GATAACAACG CCTTCTTCTT CTACAATGGC
GCTATGTCGG TCTTGCAACC TTACATCGAT AGCGGCAAGT TGGTGGTTGG TAGCGGCCAA
ACTGGTATGG ATAAAGTTGC CACCCTGCGC TGGGACGGTG CTACCGCCCA ATCACGCATG
GACAACATTT TGAGCGCCTT CTACGGCGAC AAACGGGTTG ATGCAGTGCT TTCACCATAC
GATGGTATCA GCATCGGGAT CATCTCATCG CTCAAGGGTG TTGGCTACGG TAGCGCCGAC
AAACCAATGC CAGTCGTTTC AGGCCAAGAT GCTGAAGTGC CCTCAGTCAA GTCAATTATC
GCTGGCGAAC AAAGCTCAAC CATCTTCAAA GATACCCGCG AGCTTGCTAA ATCAGTGGTA
GGTATGGTCG AAGCATCATT GTCAGGCAAA GAAGTTGCCG TCAACGATAC CAAAACCTAT
GACAATGGGG TCAAAGTTGT TCCTTCACAA TTGCTGGTTC CGGTGGTCGT CGATGTAACC
AACTGGGAAA AAGTATTGAT CGACAGTGGT TACTACAAAA AAGAAGACAT AACCAAATAA
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| Protein sequence | MTMKSPRAKF MMVLMLLMTM VLASCGEAAT PTTAPTDGGT GGTTASSDNS KFTIGISMPT
KSSARWIADG DNMVKYFQEK GFKTDLQYAE DDIPTQLSQI ENMVTKGVNV LVIAAIDGET
LSDVLQSAKD KKILVIAYDR LIKKTPNVDY YATFDNFQVG VLQAQSIETK LGLKEGKGPF
NIELFGGSSD DNNAFFFYNG AMSVLQPYID SGKLVVGSGQ TGMDKVATLR WDGATAQSRM
DNILSAFYGD KRVDAVLSPY DGISIGIISS LKGVGYGSAD KPMPVVSGQD AEVPSVKSII
AGEQSSTIFK DTRELAKSVV GMVEASLSGK EVAVNDTKTY DNGVKVVPSQ LLVPVVVDVT
NWEKVLIDSG YYKKEDITK
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