| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3638 |
|---|
| Symbol | |
|---|
| ID | 5735499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4575362 |
|---|
| End bp | 4577296 |
|---|
| Gene Length | 1935 bp |
|---|
| Protein Length | 644 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641280787 |
|---|
| Product | Beta-galactosidase |
|---|
| Protein accession | YP_001546402 |
|---|
| Protein GI | 159900155 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1874] Beta-galactosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTAG GTGTTTGTTA TTACCCCGAG CATTGGCCCC AAACGTGGTG GGCCGATGAT
GCCAAACAGA TGCAGGCCTT GGGCTTGGAA TATGTGCGGA TTGGCGAGTT TGCTTGGGCT
TTGATGGAGC CAGCCGCTGG CCAGTATGAT TGGGTATGGC TCGACCAAGC AATTGAAACC
TTGGCGAGCC AAGGCTTGAA CATTGTGCTT GGCACGCCCA CCGCTACCCC GCCTGCTTGG
CTAACGCATA ACCAGCCCGA TTTAATGCGG ATCGATGCCC AAGGCCGTCG TTTAGGCCAT
GGTGGTCGTC GCCAAGCTTG TTTGGTCAAT CCTCAGTACA TCGAATATAG CCGCCAGATC
GTCACGGCCA TGGCCGAGCG CTATGGTCAG CATCCAGCGG TTGCCGCTTG GCAAATCGAT
AACGAAATTG GCAATCATGG CTCGGCGCGT TGCTACTGCG AACATTGTGC TGCGGCTTTT
CGCCAATGGC TGATCCAACG CTATGGCGAT TTAGCAGGCC TCAACGAAGC ATGGGGCACG
GCCTTTTGGA GCCAAACCTA CAGCGATTGG CAACAAATTC CCTTGCCAAA TGTACCAGTT
GGCGGCGGCC ATAATCCCTC GTTAGTGCTC GATTATCGCC GCTTCGCCTC GGATCAGCAG
GTAGCATATT GCGCGATGCA GGCAGAAATT TTGCGCCAGC ACTCTCCAAA TCGCACGATT
TTAACCAACA TCGCACCTGG CGACGATGAG ATTAATTGGT TTGATATGGC GCAGCAAGTC
GATACAATTG CTTGGGATAA TTACCCGCAT GGCTTTCCCG ATTGGCAAGC GGTGGCGATG
TATCACGACC ATATTCGTGG CCTCAAGCGT CAGCCATTTT GGGTGATGGA GCAACAGCCA
GGCCAAATCA ATTGGACTCC CACCAATCCA CCAGTGCCAC CCAACCAAGT GCGCTTGTGG
AGCTATCAAG ATGCCGCCCA TGGTGCAGCC AATGTGCTGT ATTTCCGCTG GCGGGCATGT
TGGCTCGGCC AAGAGCAATA TCATAGCGGC CTGCGCGATC ATGCCAATCG GCCAGCGCGT
GGCAGCACCG AAGCGCGGAT TGTTGCCAAC GAATGGCAGC AGCATGGCCA GCCCGAAGCT
GCACCGCGCA AGGTTGCCTT GCTGGTTTCC TACGACGATC ATTGGGCGCA ACAACTCGAT
CCGCATGCTC AAGGCTGGAA TTATTGGCAA TTGCTGCGCA CCATCCATCG CACGCTTACC
AGCTATGGCG TTGGGGTCGA TATTGTGCAG CGTGGCACGC CACTCGCTGC CTATCAACTA
GCGATTGCTG TCGCCCCAAT GCTCGATAAT CCTGCTGAAA CTGCGGGCTG GCGTGAGTGG
GTTCAGGCAG GCGGCACGTT GATCTGCACG CCACGCAGTT TAACCAAACG CCGCGACAAT
CGCACCGCTC CCGATGGCTT CCCCAGCGGC TTGACCGATT TATTTGGGGC TGATGTTGCC
GAGTGGAGCG CCCTCGACCC AGCCAAGCCG TGGGCAGTCA AATTTGGCGA GACGAGCCAC
ACCGCACCAC TTTGGATGGA AGTGCTGAAT GTGAGCCATG CCAATAGCTT AGCAACCTGG
AGCAAAAGCT ACGCAAAGGG TCAGGCTGCA ATCACCGCCG CGACCTATGG CAAAGGCCTA
GCAGTATTGA TGGGCTGCTA TCCCACCGAG GAAATTTTGG GCGATCTGCT GCCACGGCTC
TGGCCCGCTG CCCAACGCTT GCCCAACGAA ATTGAACGCA TCGAGTTGAC CGATGGCGTG
TTGTGGTTCA ACCATGGCGA ACAAGCCCAA AGCGTCAAAC TTCAAGGCAC TTGGCACGAT
CGCTTGAGTG GCGAGCAATG CAGTGGCGAT TGTTCAATCG AAAGTTTAGG TATTCGCTGG
CTCAAACCCC TATAA
|
|---|
| Protein sequence | MPLGVCYYPE HWPQTWWADD AKQMQALGLE YVRIGEFAWA LMEPAAGQYD WVWLDQAIET
LASQGLNIVL GTPTATPPAW LTHNQPDLMR IDAQGRRLGH GGRRQACLVN PQYIEYSRQI
VTAMAERYGQ HPAVAAWQID NEIGNHGSAR CYCEHCAAAF RQWLIQRYGD LAGLNEAWGT
AFWSQTYSDW QQIPLPNVPV GGGHNPSLVL DYRRFASDQQ VAYCAMQAEI LRQHSPNRTI
LTNIAPGDDE INWFDMAQQV DTIAWDNYPH GFPDWQAVAM YHDHIRGLKR QPFWVMEQQP
GQINWTPTNP PVPPNQVRLW SYQDAAHGAA NVLYFRWRAC WLGQEQYHSG LRDHANRPAR
GSTEARIVAN EWQQHGQPEA APRKVALLVS YDDHWAQQLD PHAQGWNYWQ LLRTIHRTLT
SYGVGVDIVQ RGTPLAAYQL AIAVAPMLDN PAETAGWREW VQAGGTLICT PRSLTKRRDN
RTAPDGFPSG LTDLFGADVA EWSALDPAKP WAVKFGETSH TAPLWMEVLN VSHANSLATW
SKSYAKGQAA ITAATYGKGL AVLMGCYPTE EILGDLLPRL WPAAQRLPNE IERIELTDGV
LWFNHGEQAQ SVKLQGTWHD RLSGEQCSGD CSIESLGIRW LKPL
|
|---|
| |