| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3635 |
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| Symbol | alaS |
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| ID | 5735496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4570934 |
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| End bp | 4573603 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641280784 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001546399 |
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| Protein GI | 159900152 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.988674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTT CAGAGCTACG GCAGCGTTTC TTAGACTACT TTGCGCGGCA AGGGCACGCC
GTCGTGCCAA GTAGCTCGCT GATTCCTGCC GATAATCCCA CCCTGTTGTT TACAGTGGCT
GGGATGGTTC AGTTTAACGA TGTCTTTTTA GGTCGCGAAA GCCGTCCCTA CAGCCGCGCA
GTTTCATCGC AAAAATGTTT GCGCATCTCC GGCAAGCAAA ACGACCTTGA AAATGTTGGG
CCATCGCCGC GCCACCACAC CTTTTTTGAG ATGCTGGGCA ATTTTTCGTT TGGCGATTAT
TTCAAAAAAG ATGCCATCCG CTTTGCCTGG GAGTTTCTGA CCCAAGAAAT TGGGCTTGAT
CCCAAACGCA TGTGGGTCAG CATTTACGAA GGCGATGAGC AAATTCCTGC CGACGAAGAA
GCTCATGATT TATGGCTGGC CTATATGCCT GCCGAGCGGA TTTTGCGCTT CGATGCCAAA
GATAATTTGT GGTCGGCAGG TGATGTCGGG CCACGCGGGC CATGCTCAGA AATTCATTAT
TACATCGGCG ATGATCCTGA TAACCAAGTG CCTGAAGGTG TTAACTCTGA AGATGACACC
TATATGGAAA TTTGGAACTT GGTGTTTATG CAATACAACC GTGATGAAAA CGGTGTATTG
ACGCTGCTCC CCAAGCCATC AATCGACACA GGCATGAGCC TCGAACGCTT GGCAATTGTT
AAGCAAGGCG TGTTTCGCTC GTATGAAACC GACTTGTTCA CGCCAATTAT CCACACGGTG
ATGGAATTGC TGGGCACTGG CAGCGACCAT TATCAAGCCA ATAGCTCGGC TTATCATGTT
GTAGCCGACC ATAGCCGCTC GATCGCTTTT ATGATTGCCG ATGGCTTGCG GCCTGGTAAC
GAAGGTCGTT CGTATGTGTT GCGGCGGTTG GTGCGGCGGG CGGCCTATTT TGGCCAAACG
ATCGGCTTCA AAGCGCCGTT TTTGGCCGAA ACGATCGCAA CTGTGATCGA TATGATGGGT
GCTGCCTACC CTGAGTTGCG CAGCAAACAA GCCTATATTG CCGAGGTTGT GACGGGCGAA
GAAGAACGCT TCAACAAAAC TTTGGCTGGT GGTTTGCGCC AACTCGAAGC GATGCTGCCC
AATCAAGCCG ACAAAGCCGT TTTCAGCGGT GCTGATGCCT TCAAGCTCTA CGATACCTAT
GGCTTTCCGC TCGACTTGAC CGAACGAATC GTGGCTGAAC GTGGTTTGAC GGTTGATTTG
GCGGGCTATG AGGCTGAACT TGAGGCTCAA CGCGCTCGAG GCCGTGGTGC TGCTCAATTC
AAAAAAGGTG CAGTGACCGA ACGCTGGGCT GAGCGTAATT TGGCTCCAAC TAGCTTTACT
GGCTACAACG AGCTGGAAAG CTGGGGTCAT GTTTTGGCGC TCGAATTCGA TGGCGAGGAG
CTTGGCACGG TTCAACGTGG TCAAGAAGTG GCCTTTGTGC TTGATCGCAC GCCCTGCTAT
GCCGAAAGCG GCGGCCAAAT GGGCGATAGT GGTGTGTTGG TCGGGCCACA TGGCACCATC
GTGATCGACG ATGTGCAAAA GCCCGTGCCT GGTGTATTTG TCCATCGTGG CAAAGTCAGC
AAAGGCAGCG TGAGCCTTGG CGAGCAAGTC ACCGTAACGG TTGATGCAGC GCGTCGCCGC
GATATTGTGC GTAATCATAC AGCAACCCAC TTGCTGCACC GAGCCTTGCG CGATACGCTT
GGCGATCACG CTGAGCAAAA AGGCTCGTTG GTTGCACCCG AACGCTTGCG CTTCGACTTC
AACAACCAAA AAGGCTTGAG CAGCGAACAA CTCCAGCAAA TCGAAGATCA AGTTAATGCC
TGGATTCGCG CTGATAGCAA GGTTGAGGCT GCCGAAATGG CCTTGCCGCA AGCCCGCGAA
TTGGGCGCAA TGGCCTTGTT TGGCGAAAAA TATGGCGATG TGGTGCGGGT GGTCACCGTT
GGTTGTGGCA ATGCAAGTGA TCACATCCAT ACCAACAGCG AAGCGCCAGT ATGCTCACGC
GAGCTTTGCG GTGGTGTTCA CGTTGCCCGC ACTGGCGAAA TTGGCTTCTT CAAAATCGTC
AGCGAAGGCT CGGTTGCCTC AGGTGTGCGG CGGATCGAGG CAGTAACTGG CCGCGCTGCT
GCTGAATGGG TCAGCCAACA AGCCCAATTG ATTCGCACGC TCGGCGATAA ACTGGGTGCA
CAACCAGGCA AAGTTGAAGA AAAACTCGAT GCCCTGTTGC TCGACCAAAA AGCTCGCCGC
GACGAAATCG AACGCTTGCG CGGCGAAATT GCTGCTGGTC AAGTCGATAG CTTGCTCGCC
CAAAAAATTG AGCAAGCTGG CACGCCATTG GTGGTCGCCC GCGTTGAAGC CAGCGATGCT
GATAGCTTCC GCCGTTTGGG CGAACAACTA CGCGATAAAA TTGGCAGTGG CGTGGTGATC
CTCGGCACGG TAATCGATGG CAAGCCTTTG CTGCTCGCCG CTGCAACCGC TGATCAAGTC
AAAGCTGGTC GGCATGCTGG CAATTTAGTC AAAGCCTTGG CTGCCAAAGT TGGCGGTGGT
GGTGGCGGTC GCGCCGATTT TGCCCAAGCT GGCGGTCGCG ATGCGGCTGC GCTTGATCAA
GCCTTAGCCG AAGCCAACGG TTTGCTGTAA
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| Protein sequence | MKGSELRQRF LDYFARQGHA VVPSSSLIPA DNPTLLFTVA GMVQFNDVFL GRESRPYSRA
VSSQKCLRIS GKQNDLENVG PSPRHHTFFE MLGNFSFGDY FKKDAIRFAW EFLTQEIGLD
PKRMWVSIYE GDEQIPADEE AHDLWLAYMP AERILRFDAK DNLWSAGDVG PRGPCSEIHY
YIGDDPDNQV PEGVNSEDDT YMEIWNLVFM QYNRDENGVL TLLPKPSIDT GMSLERLAIV
KQGVFRSYET DLFTPIIHTV MELLGTGSDH YQANSSAYHV VADHSRSIAF MIADGLRPGN
EGRSYVLRRL VRRAAYFGQT IGFKAPFLAE TIATVIDMMG AAYPELRSKQ AYIAEVVTGE
EERFNKTLAG GLRQLEAMLP NQADKAVFSG ADAFKLYDTY GFPLDLTERI VAERGLTVDL
AGYEAELEAQ RARGRGAAQF KKGAVTERWA ERNLAPTSFT GYNELESWGH VLALEFDGEE
LGTVQRGQEV AFVLDRTPCY AESGGQMGDS GVLVGPHGTI VIDDVQKPVP GVFVHRGKVS
KGSVSLGEQV TVTVDAARRR DIVRNHTATH LLHRALRDTL GDHAEQKGSL VAPERLRFDF
NNQKGLSSEQ LQQIEDQVNA WIRADSKVEA AEMALPQARE LGAMALFGEK YGDVVRVVTV
GCGNASDHIH TNSEAPVCSR ELCGGVHVAR TGEIGFFKIV SEGSVASGVR RIEAVTGRAA
AEWVSQQAQL IRTLGDKLGA QPGKVEEKLD ALLLDQKARR DEIERLRGEI AAGQVDSLLA
QKIEQAGTPL VVARVEASDA DSFRRLGEQL RDKIGSGVVI LGTVIDGKPL LLAAATADQV
KAGRHAGNLV KALAAKVGGG GGGRADFAQA GGRDAAALDQ ALAEANGLL
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