| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3630 |
|---|
| Symbol | |
|---|
| ID | 5735491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 4562845 |
|---|
| End bp | 4564887 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641280779 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001546394 |
|---|
| Protein GI | 159900147 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.253169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAC GTTTTCGTTG GTGGCCGACC ATTCGGCGCT ATCGACTGAT ATTAATGCTT
TTGCTGGTTG GGGCGGCAGC GGTTCGCTTA GGGCTATGGC TATTGCCAAG CCACCAACCA
GCCAATGATG AAGTTGAATA CCTCGCGGTT GCCCGCGATT TGTTGGCAGG CCAAGGTTGG
CGTTTTTATG ATGCGTACCC ATGGCTACGT GCTCCGTTGT ACCCGCTCTA TCTGGCGGCA
ACCCTCTGGT TAAGCAACAA CGATCCCCAA CATGCCTTGC TCTTTAATAT CGGTTTGAGC
CTGATTCACC TGTGGTTGCT GTGGTTACTT GGGCGCGATT GGGCTGGCGA TCATCCTCAT
GCTGAAAAAG TTGGCCTGTG GACAGCTGGC TTGGCTAGTG GTTTGTTGAC CTTCGCAACT
TTTGCCAATT TATGGATGAG CGAAACGCTC TGGAATGTGC TTTGGGCTAG CAGTTTGCTG
CTGATCCTGC GTTGGCAGCG GACGAAACAA CTACGTTTTG CCTTGGCAGC AGGCTTAACG
ATTGGCCTGA CGATTCTGAC GCGCTCGTTG CCCTTAGCAT TTGTGCCAGT ATTAATTGGC
TGGATGTGGT GGAATTGGCG AGGTTGGCGG AGTGTGCAGC ATGGCTTGGC CTTGGGCTTA
GTCGCCTGTG CGGTGGTTGC ACCATGGTCG TTACGCAATT GGCTGGCTTA TGGCCGTTTG
ATTACGGTTG AAACTGGCTT TGCCTATAAT CTATGGGCAT TTAGTGAACC AGCACTTGAG
CTAAGCGAGA TTAATACTAT TCTCGCGGCG ATACCTAATC CAGCGGAGCG AGCTGATTAT
GCCTCAGCCA AAGGCCGCGA GTTGTTAGCC GCCGATCCGA GCATTTTGGC GCGTAAGCCT
TGGACGAATA CGGTGTATCT CTGGCGGATC AAGCCGATTG AGGATCGTTT TATTCAGGCC
AATTATTATA GTGATGTGGC TTTACCATAT TTAATTGCTG CCTTGATTTT CGATGATATG
TGGTATGTGC TGTGTGTCGT GTTGGCACTA TGGGGCTTTG CGCGTGCTCC GCGTGATGCC
CGCTGGTGGC TGGCCTTGCT CTGGGTGGGT TATATTGTTG GTAGCACGAT GTTCACCCAC
GGCGAGGCCC GTTATCGCCA GTTTTTCTGG CCAATCATGC TGATGTATGC GGCGTTTAGT
TTGGCTAAAT TACGGGTCAG CACGCCAATT TGGCAACGCT TGGGAGCAAG CGCACTCGGC
CTAATCATTG GCTGGGTGAT TATTGATCAT TCGCCTTGGC AATTGCTGCA ACAGCAAATA
AGCCGTGGTT GGTGGCGCTG GCAAGCCGAC CAAGCCCTAG CGGCTGGCGA TTTGGCCCAA
GCTGAGGCAG CAAGTTTACG CGCACTCAAT CGTTTGCCTT CTGCTGATGG CTGGTTGGCC
TTGGCCAACA TTAAAGAGCA ATTTGGTCAA GCTGATGCTG CACTCGAAGC CTATATTGCT
GCGGCCAATC ACAACCGCGA TTATCCCTTG GCTAGCTATC GCTTAGGCAA TTATTTACTC
AAACGCGGGG ATCTGGCAGC GGCGCGTGAG GCCTGGGCTA ACCCCTATGT TGATCGCACC
AGCCTGCTGG ATTGGGCTTG GCGGTCAGCC GATCGCTCAG CCGAAACACA GATCGATCTT
GGGGCTGGCT TGGATATTGG CTTGATCGAG GGATTTTATC CGGCTGAAAA CCTGAATGCG
AGCACCGCCC GTTGGTCAAC CGCTCATGCT CGTTTGCGCC TGCCTGCGGG CGAGGCTGGC
GTTGTCCGTT TGCGGATTGC CAATCCACGG CCAGGCGATG CGCCAGCGGC AAACCTGCAA
ATCTGTGTTA GCGAGCAGCA CTGTATCCAT GCCGAACTTG GGGCTGAGTG GCGGGTGCTG
CATCTGCCAC TTGCTGAGAG TTCAAACGAA CGTCAGATTG AACTATTGGC TCAGCCATGG
CAAGCCCCAA GCGACCAACG TCAGCTGGGC ATTGTGGTGG ATTGGGTTGA ATTAGCGAGG
TAA
|
|---|
| Protein sequence | MDERFRWWPT IRRYRLILML LLVGAAAVRL GLWLLPSHQP ANDEVEYLAV ARDLLAGQGW
RFYDAYPWLR APLYPLYLAA TLWLSNNDPQ HALLFNIGLS LIHLWLLWLL GRDWAGDHPH
AEKVGLWTAG LASGLLTFAT FANLWMSETL WNVLWASSLL LILRWQRTKQ LRFALAAGLT
IGLTILTRSL PLAFVPVLIG WMWWNWRGWR SVQHGLALGL VACAVVAPWS LRNWLAYGRL
ITVETGFAYN LWAFSEPALE LSEINTILAA IPNPAERADY ASAKGRELLA ADPSILARKP
WTNTVYLWRI KPIEDRFIQA NYYSDVALPY LIAALIFDDM WYVLCVVLAL WGFARAPRDA
RWWLALLWVG YIVGSTMFTH GEARYRQFFW PIMLMYAAFS LAKLRVSTPI WQRLGASALG
LIIGWVIIDH SPWQLLQQQI SRGWWRWQAD QALAAGDLAQ AEAASLRALN RLPSADGWLA
LANIKEQFGQ ADAALEAYIA AANHNRDYPL ASYRLGNYLL KRGDLAAARE AWANPYVDRT
SLLDWAWRSA DRSAETQIDL GAGLDIGLIE GFYPAENLNA STARWSTAHA RLRLPAGEAG
VVRLRIANPR PGDAPAANLQ ICVSEQHCIH AELGAEWRVL HLPLAESSNE RQIELLAQPW
QAPSDQRQLG IVVDWVELAR
|
|---|
| |