Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3626 |
Symbol | |
ID | 5735487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4556712 |
End bp | 4558478 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641280775 |
Product | ABC transporter related |
Protein accession | YP_001546390 |
Protein GI | 159900143 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.058238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCATC TAGATCAGTA TCGACGGCTA CTGGCGCACC TACGGCCTTA CCCTAGGCAA GTGTTCTATG CCTATGGTTC TACTCTATTG GCGGTTGGTT TAAACATCGC AATTCCGCAA TTGCTCAAAC AAGCAATTGA CGAAGGCATT GCTAGCGGTT CAAGTCGTGC TTTGCTGATT ACAGCACTGA TTATTTTGGG CGTGGCGGTG GTACGGGTAA TTTTTGGCTT TGCTCAACGC TACTATGGCG AATGGCTGAG CTTTCGAGTG GCCTATGATT TACGCAATCG TTTTTACGAT GCGATTCAAC GGCTGCCATT TTCGTTCCAT GATCGCTCAC AAACTGGCGA CCTGATGAGC CGCGCCACCA GTGATATTAC CGAAACTGAG CGCTTTGTTG GGGTTGGGCT ACTCGAACTT AGCTCAACTA TGCTCTTACT ATTCGGCATT ATCGTGGCGA TGGTCGTTGA AGATTTACGC TTGACTGGCT TGGCACTCTT GCCCTTGCCT GTGCTGCTCT ACGCCACAAT TCGCTTTGGC AACACGGTTG AGCCGCTGTT TACCAAAATT CAAGAGCAAA TGGGCAAGCT TTCGACTATG ATGCAAGAAA GCCTGACTGG TATTCGCGTG GTCAAGGCTT TTGCGCGTGA GCCATATGAA CTTGAAAAAT TTGATCGTGA TAATGGCGAG TGGTATAACC GCCGTTTTGC GGTAATTCGC ATTTGGGGCA ATAGCTGGCC CTTTTTCAAC TTTTTGGTCG CCATCAGCGT GATTATTTTG CTCTGGATTG GCGGACCACA GGCGATGAAC GGCACAATTA CGGTTGGCTC GTTATTCGCG ATGATCAGCT ATGTGCTATT GCTGAATAAC CCTGTGCAAC GCTTGGGCTT TACCGTCAAC TTGGCAGCGA CAGCGGTAGC AAGCTCGGCT CGCGTATTTG AAATTATCGA TACGTTTGAT GAATTAGCCG ATAAAGCTGA TGCCCATTCG TTGGAGCATG TGCAGGGCAA CGTTAAATTT GAGCATGTTT CGTTTGCCTA TCGCGAAGGT GGCCGCCCAA CGTTGCACGA TATTTCGTTC GAGGCCAAGC CTGGTCAAGT TGTGGCCTTG ATGGGGCCAA CTGGCTCAGG CAAAAGCACG ATTACCAATC TCATCCCACG CTTTTACGAC CCAATCGAAG GTCGGGTGTT GGTCGATGAC CACGACGTGC GTGATTTGGC AATTCAAAGT TTGCGCCAAC AAATTGGGAT TGTACTGCAA GATTCATTTT TATTTAGCTC AAGCATCGCC GATAACATTC GCTACGGTCG GCCTGAGGCC AGCGATGAAG AAGTGATTGC GGCAGCCAAA GCAGCGCGTG CTCATGATTT TATTTTGCAT TTTAGCGAAG GCTACCAAAC CAAAATTGGT GAGCGTGGCG TGACCCTCTC TGGTGGTCAA CGTCAGCGCA TCGCGATCGC TCGTGCCTTG TTGCTCAACC CACGCATTTT AATTTTGGAT GACTCGACAT CGAGCGTTGA CACGGAAACT GAGCACTTGA TTCAACAAGC GCTTGAACAA CTGATGCAAG GCCGCACAAC CTTTGTGATT GCCCAACGCT TGCTGACGCT GAAAAATGCC GACCAAATTT TGGTGCTCGA TGCTGGCAAC GTCGTGCAGC ATGGCACGCA CACCGAGCTA CTGGCCCAAC CAGGCTTGTA TCGCACCATC TACGATCTGC AACTCAAAGA TCAAGAGGAA AGCCTTGTTG AAGAACAAAG GGCATAG
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Protein sequence | MKHLDQYRRL LAHLRPYPRQ VFYAYGSTLL AVGLNIAIPQ LLKQAIDEGI ASGSSRALLI TALIILGVAV VRVIFGFAQR YYGEWLSFRV AYDLRNRFYD AIQRLPFSFH DRSQTGDLMS RATSDITETE RFVGVGLLEL SSTMLLLFGI IVAMVVEDLR LTGLALLPLP VLLYATIRFG NTVEPLFTKI QEQMGKLSTM MQESLTGIRV VKAFAREPYE LEKFDRDNGE WYNRRFAVIR IWGNSWPFFN FLVAISVIIL LWIGGPQAMN GTITVGSLFA MISYVLLLNN PVQRLGFTVN LAATAVASSA RVFEIIDTFD ELADKADAHS LEHVQGNVKF EHVSFAYREG GRPTLHDISF EAKPGQVVAL MGPTGSGKST ITNLIPRFYD PIEGRVLVDD HDVRDLAIQS LRQQIGIVLQ DSFLFSSSIA DNIRYGRPEA SDEEVIAAAK AARAHDFILH FSEGYQTKIG ERGVTLSGGQ RQRIAIARAL LLNPRILILD DSTSSVDTET EHLIQQALEQ LMQGRTTFVI AQRLLTLKNA DQILVLDAGN VVQHGTHTEL LAQPGLYRTI YDLQLKDQEE SLVEEQRA
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