Gene Haur_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3623 
Symbol 
ID5735484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4554480 
End bp4554905 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content49% 
IMG OID641280772 
ProductGtrA family protein 
Protein accessionYP_001546387 
Protein GI159900140 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTT TAATCGCTGA AGATCGGCAA CGTTGGTGGC GTTTCGCCTT GGTTGGCCTC 
AGCGGAACCT TGGTCGATCT GATCTTGCTG GGCATGCTCA AAATGCTGGG TTGGGCGACG
ATTTTGGCCA ACATTGTTTC CTACAGCGTC GGCATCATCA ATAACTTTTG GTGGAATCGC
CGTTGGACGT TTGCCAGCAA CAATCCCGCT TGGTTGCCGC AATTTTTACG CTTTGGGGCA
ATTAGCCTAA GCGCCTTGGT GATCAATACC TTGATTGTGG CCGTAACCGA AGCTCCGCTC
AATGATCTTT GGCAAAGCCA TGGCTATGTG CTAGCCAAGG GAGTGGCGAC GATGGTTGGT
TTTGCTTGGA ATTTTGGTTT GAATCGAATT TGGACATTTA ATCTTGAACA TGAGGTGGTC
GCATGA
 
Protein sequence
MTILIAEDRQ RWWRFALVGL SGTLVDLILL GMLKMLGWAT ILANIVSYSV GIINNFWWNR 
RWTFASNNPA WLPQFLRFGA ISLSALVINT LIVAVTEAPL NDLWQSHGYV LAKGVATMVG
FAWNFGLNRI WTFNLEHEVV A