Gene Haur_3594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3594 
Symbol 
ID5735455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4523981 
End bp4524880 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content51% 
IMG OID641280743 
ProductABC transporter related 
Protein accessionYP_001546358 
Protein GI159900111 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAAG CACCTGCTTT AGTGGTAGCA AATATTTATA AACAATTTGG CACGAGTGAA 
GTCAAACATT GGCTCACTCG TCGCCCTCGT CCTAACCCCA AGCCACCAGT CGTCGCGGTT
GATCACGTCA GCCTCGATGT GGCCGAGGGC GAGATTTTTG GCTTATTGGG AGCCAACGGC
TCAGGCAAAT CAACCTTGAT TCGCTTGATC TCAACCTTAC TTATTCCCGA TTCGGGCAAG
ATTCAGGTTT TTGGCCTCGA TGTCCGCAAC GATGAGAAAG CCGTCAAACG CTTAATCAAT
CGGGTTAGCG TTGAGGCTTC GTTTTTTAAG AAATTGAGCG CCTTAGAAAA CTTAATGTAC
GCCGCCCGTT TGTATGATCT CAAGCCAGCC TATGCTCGCG CCGAATGTGT GCGCATTTTG
GCGGCGCTGG GCTTGAAGGA AAAACGCTTG TACGAGCCGC TGGAAAATAT GTCACGCGGC
ATGCAGCAAA AAGTTGCAAT CGCCCGTGGC CTGTTGACCA AACCACGGTT ATTGCTGCTT
GATGAGCCAA CGACCGGGCT TGACCCACGT TCGCGCTCGG ATGTGCAACG CTTTGTGCGG
CGTTTGCGCG ATGAATCGGG CACAACCGTC TTTTTGACCA CCCACGATAT GGACGAAGCC
GACCGGCTTT GCGACCGCAT CGCGATTATC GATGCTGGCA AAATTGTAGC TTTGGATACC
CCGCAAGGTC TCAAAGATCG CATTGGTCAG CAAATTGGCA AGTCCAATGC CACTATGGAA
GACGTTTTTA TGACCCTCAC AGGCCGATCA TTGGCCGATG AAGATTTTAT GGACGAAGAC
ACCGACTATA TGGAGCATCA TCATGAAGAC AACGCTGAAC ACAGCATCGA AGGAGCGTGA
 
Protein sequence
MQQAPALVVA NIYKQFGTSE VKHWLTRRPR PNPKPPVVAV DHVSLDVAEG EIFGLLGANG 
SGKSTLIRLI STLLIPDSGK IQVFGLDVRN DEKAVKRLIN RVSVEASFFK KLSALENLMY
AARLYDLKPA YARAECVRIL AALGLKEKRL YEPLENMSRG MQQKVAIARG LLTKPRLLLL
DEPTTGLDPR SRSDVQRFVR RLRDESGTTV FLTTHDMDEA DRLCDRIAII DAGKIVALDT
PQGLKDRIGQ QIGKSNATME DVFMTLTGRS LADEDFMDED TDYMEHHHED NAEHSIEGA