Gene Haur_3591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3591 
Symbol 
ID5735452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp4520659 
End bp4521696 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content53% 
IMG OID641280740 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_001546355 
Protein GI159900108 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATGGG CGATTTATCC GGTTGAACTA CGCTTGCGCA ACACGTTTCG GATTGCCCAC 
GGAGCTAGCA ATACCCGCCA TAATGTGTTG TTGAATTTAG ATGATGGCTG GGGCGAGGCC 
GCTGCTGTAG CCTACCACGG CGAAACTGCT GCTAAAATTC AGGCTTGGCT GGAACGCTAT 
CGCGAAACAA TTACCAGCAG CTATGATCCA GCGGCAATTC ATTGGCTCTT GGCCAAGCTC 
GATTTTGAGA GCCGCGCCGC CCGCGCTGCT GTCGATTTAG CCTTGCATGA TCGCTTAGGC 
CAACAACTTG GTGTGTCATT GCGTCATCTT TTGGGCTTGA ACGGCTTAGA ACTCCCACAA 
ACCTCAGTTA CCTTGCCAAT TGAAGAGCCT GAAGCTTTGC GCCAACAAGC TTTGGCCGTA 
GCGCATTATC CAATTCTCAA GGTGAAGTTG GGCGGCCCTG CCGATTTAGC CAGCGTGGTT 
TTGATTCGCG AAGCCGCACC CAACAGCCGC CTGCGGGTTG ATGCCAATGC TGGTTGGAGC 
CGTGAAACCG CCGCCCAATT GATTCCGGCG CTGGCTGAAT TGGGCGTGGA GTTGATTGAG 
CAACCGTTGG CAGTTGATGA TTTAGCGGGC TATGCTCAAC TTAAAGCTGC CAACTATGGC 
GTGCCAATTT TTGCCGACGA GCCGATTAAA ACTGCGGCTG ATGTGGCGCG TTGGGCCAAG 
GTGGTTGATG GCGTAAACCT CAAGTTGATG AAAACTGGCG GAATTGTCGG GGCGTGCGCA 
GCGATTGCCA CCGCCAGAGC CCATGATTTA CAAGTGATGC TTGGGTGTAT GATTGAAAGT 
AGCATCGGGG TTTCAGCGGC CTGTGCTTTG GCTGGCTTGG CCGATTTCGT TGACCTTGAT 
GGGCCATTAT TGATCGCCAA CGATCTGGCA ACTGGATTGA ACTTTGCAAC CGCTACGATT 
CAGCCAGCAG CAACGCCAGG TTTAGGCGTG CAAATTGACT GGACAGCACT AAACAGCGCC 
CGACTTGAAA CACGCTAG
 
Protein sequence
MEWAIYPVEL RLRNTFRIAH GASNTRHNVL LNLDDGWGEA AAVAYHGETA AKIQAWLERY 
RETITSSYDP AAIHWLLAKL DFESRAARAA VDLALHDRLG QQLGVSLRHL LGLNGLELPQ 
TSVTLPIEEP EALRQQALAV AHYPILKVKL GGPADLASVV LIREAAPNSR LRVDANAGWS 
RETAAQLIPA LAELGVELIE QPLAVDDLAG YAQLKAANYG VPIFADEPIK TAADVARWAK 
VVDGVNLKLM KTGGIVGACA AIATARAHDL QVMLGCMIES SIGVSAACAL AGLADFVDLD 
GPLLIANDLA TGLNFATATI QPAATPGLGV QIDWTALNSA RLETR