Gene Haur_3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3589 
Symbol 
ID5735450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4517718 
End bp4518659 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content51% 
IMG OID641280738 
Producthypothetical protein 
Protein accessionYP_001546353 
Protein GI159900106 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCTTG CAATTGTTTT GACGGTATTG CCAACGCTGC TGTACGTGAC CTTTTTGTGG 
TGGCTTGATC GCTATGAAAA AGAACCATGG CCGCTGCTGT TAGCAGTGTT TGTATGGGGT
GCGGTGCCTG CCGTGGCCCT CGCGTTGTTG GCTGAATTGC CCAATACTGC TTCAACTTTA
GGTTTTGACC GTGGCAGCCA ACCAGTTTGG TATGCTCCGT TGGTCGAAGA ACCACTCAAA
GCCTTGGCAT TGTTTGGCAT TTATATGTTC TTTCGCTATG AGTTCGATGG CGTGCTCGAT
GGCATTATTT ATGGCGCACT GATTGGTTTT GGCTTTGCTA TGACCGAAAA TGCGATTTAT
TTTGCTAGTC GTGGCGGCTC GATTACTTCA TTACTGTGGC TGCGTGTGGT GCTATTTGGC
TTTAATCATG CCTTCTACAC CAGCATCATT GGGGTGGCGT TGGGCATGAT TCGCTACGAG
CGCCGCCGTT GGGTGGTGGT TGTGATGCAG CCATTGAGCC TGATTTTGGC TGTCGTGTTC
CACGCACTGC ACAATATGAC GATTAGCTAT CGCTTTCCTG GTGTATTGAT CGCATGGTTG
ATCAGCAGCG GCGGCGTGTT AATTGTGGTG TTGGTGGCAA TCATCGCCTG GCGTAAAGAG
CGCTATTGGA TCGATCTAGA ATTGGTTGAG GAAATTCGCT GTGGATTTAT CGACCAAGCG
ACCTACCAAA CCGTGCGGTC AACCCGCCGT CGGGTGCAAA GCCAATGGGA AGCGCTCTTT
CGCGGCGGCT GGCGAGCAGT GCAAACGGTG CGTACTCGCC ATCATTTACT CACTGAGTTG
GCATTCTTGA AATATCAGCT GCGGATCGGC GATGTGCATT GTCGTCCCGC CGATTTATAC
CCGCTGCGCC GCCGAATTCT CGAAGTTCAC GAAGATTTCT AG
 
Protein sequence
MWLAIVLTVL PTLLYVTFLW WLDRYEKEPW PLLLAVFVWG AVPAVALALL AELPNTASTL 
GFDRGSQPVW YAPLVEEPLK ALALFGIYMF FRYEFDGVLD GIIYGALIGF GFAMTENAIY
FASRGGSITS LLWLRVVLFG FNHAFYTSII GVALGMIRYE RRRWVVVVMQ PLSLILAVVF
HALHNMTISY RFPGVLIAWL ISSGGVLIVV LVAIIAWRKE RYWIDLELVE EIRCGFIDQA
TYQTVRSTRR RVQSQWEALF RGGWRAVQTV RTRHHLLTEL AFLKYQLRIG DVHCRPADLY
PLRRRILEVH EDF