| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3587 |
|---|
| Symbol | |
|---|
| ID | 5735448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4514514 |
|---|
| End bp | 4516313 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641280736 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001546351 |
|---|
| Protein GI | 159900104 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGAG AACATCGCAG AGGATTTTTT CGCAGTTTAT TGCTGGCAAG CCTCTTTTTG
AGTGCGATTG GCCTTGCACA GCCTGTTGCA ACCACCCAAC CGCAATCAAT GTTAGTGCAA
GGTGCTGCGC TAAGCAACCA AGCTAGGGCA ATTCAAGCAG TTGGCGGCAC TGTCGAACGC
CAATTTGCCC GCTTTGAAAC CAGCGTAGCC CAATTAACCA AACCACAAAT TGCTCAACTG
CAAGCGCAAG GCTTGCGGGT TTTTGCCGAT CAAGCGGTTG CTAGCTCAGC GCAAGGAGCT
GTTGATCAGC CAATTGCTGT GCAGGCTGGC CCCAAAAGTA GCAACCCTGC GCCATTGCAA
TATCCATCGA TTGTAACCGG CGCTGATGTG GTGCAACGCC GTGGTATCGA TGGACGCGGC
GTGACCGTGG CAGTGATCGA TTCGGGTTTG CCAGCGATCG AACGACCTGA GCGTTGGCAG
CGCATCGATA ACACGACTGC TCGCTACAAC CAAGGCAGCC GTTTTTTGAT TTATAAAGAC
ATGTTGGCAA GCAACCAAAT TACGAATAGC AGCGACCCCT ACGGCCATGG AACGCATGTA
TTTGCCACTT TAGCCGATAA TCGCGCTTTG CCAGCAGGCT ATAGCGGAGC CAAAGTCGGG
ATTGCCCCAG GCGCGAATTA TGTGGTCGTT CGGGCCTTAA ATTCGCAAGG CCAAGCCTCG
TATAGCACGA TTATTGCGGC GATTGATTGG GTGATTGAGC ATGCTGACGA GTACGATATT
CGGGTGCTGA ATCTCTCGTT GCAAGCCGAA GTGATTGCGC CCTACTGGTA TGATCCGCTC
AATCAAGCGG TGATGCATGC TTGGAATGAG GGCATCACGG TGGTGGCAGC GGCTGGCAAC
ACTGGCCCAA ATCCTGCCAC GATTATGGCT CCAGCCAACG TGCCCTATAT CATCAGTGTC
GGGGCAATTC GGCCTGCAAT CTACAACGAC AATGGCAGCG ATAGTTTAGC AGCCTATTCA
TCGGCTGGGC CAACCGAAAG TCGTTTTGTT AAGCCCGATG TGGTGATTGC TGGCTCGCGG
GTCATTGCAC CCCTGCCCGC CGATAGTGTG TTAGCTAATT CTGGGTCCGC AGGTTTGGTT
AGCGAACGCG CCAAACTCGA ATGGGCTGAT TTGAAAACCT CGCAACAGCT TAATTATTAT
GCCTTGAGTG GCACATCGAT GGCCGCCGCC GAAGTCAGTG GAATTGTCGC CTTGTTGTTG
CAAGATGAGC CAAATTTGAC CAATAACCAA ATTAAGGCTC GTTTGACTGG CACGGCCCAA
CTTGCCACTT TGGATGATGG TCAAGCCGCT TACAGCACGT GGCAACAAGG CGCAGGCAAA
GTTGTGCCAA CTGCGGTGAT CGATGGTAGC AACACTGGCG CTGCCAACGC GGGAATGGAT
TTGCCGACCG ACCTGATTGT GAGCAGCAAC CCCGATGATA CCAGCAACCA TTACCAAGGC
TCGACTGAGT ATGATGCGGT GACCAACACT TTTACTGATA ACACCACGAC CTATAGCTCA
ACCCTTGCGA CCAGCTACAG CACCTGGGCG GGGAGCTATA GTACATGGGC TGGCAGTTAT
CTAACATGGG CTGGTAGTTA CAGCACGTGG GCTGGCAGCT ACAGCACGTG GGCTGGCAGT
TACAGCACGT GGGCTGGCAG TTACAGCACG TGGGCTGGCA GTTATAGCAC GTGGGCTGGC
AATAACGCTG CTGCGAGTGG AACCACCAAT GTCAACGCTG GAAGCCTCGT GAGCGACTAA
|
|---|
| Protein sequence | MDREHRRGFF RSLLLASLFL SAIGLAQPVA TTQPQSMLVQ GAALSNQARA IQAVGGTVER
QFARFETSVA QLTKPQIAQL QAQGLRVFAD QAVASSAQGA VDQPIAVQAG PKSSNPAPLQ
YPSIVTGADV VQRRGIDGRG VTVAVIDSGL PAIERPERWQ RIDNTTARYN QGSRFLIYKD
MLASNQITNS SDPYGHGTHV FATLADNRAL PAGYSGAKVG IAPGANYVVV RALNSQGQAS
YSTIIAAIDW VIEHADEYDI RVLNLSLQAE VIAPYWYDPL NQAVMHAWNE GITVVAAAGN
TGPNPATIMA PANVPYIISV GAIRPAIYND NGSDSLAAYS SAGPTESRFV KPDVVIAGSR
VIAPLPADSV LANSGSAGLV SERAKLEWAD LKTSQQLNYY ALSGTSMAAA EVSGIVALLL
QDEPNLTNNQ IKARLTGTAQ LATLDDGQAA YSTWQQGAGK VVPTAVIDGS NTGAANAGMD
LPTDLIVSSN PDDTSNHYQG STEYDAVTNT FTDNTTTYSS TLATSYSTWA GSYSTWAGSY
LTWAGSYSTW AGSYSTWAGS YSTWAGSYST WAGSYSTWAG NNAAASGTTN VNAGSLVSD
|
|---|
| |