| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3580 |
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| Symbol | |
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| ID | 5735441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4501316 |
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| End bp | 4502782 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641280729 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001546344 |
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| Protein GI | 159900097 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAC AGCCTGAAAC GATTGTCCAG AGTGCGGCTC GTAATACATT ATGGTCGTAT
GCCGCCACCT ATGGCGGCAA AATTCTGATC TTTATCACCA CGGTGATTCT GGCTTATTTC
GTGACCAAAG CTGAATACGG CTTGGTCGGC ATGGGCTTGA CGGTTATCGC CTTTCTTGAG
GTGATGCAAG ATCTAGGGAT CGGCTCGGCA GTAATTTATC GCGAAGGCGA GGATGCTGCT
AACACCGCTT TTTGGCTTGG CTGTGGAATC GCCTTGACGC TCTTTAGCAT AACTTGGTTG
GCAGCACCCT TAGTTGCCAC CTATTTCTTG CAAAATAATC CTGATGTGAT TCCGATTATT
CGGGCCTTGG GCTTGAGCTT TCCCTTGTTT GCCATGCGCA ATATTCACGA TGCCTTGTTG
CGCAAACGCA TGCAATTCAA AAAACGCTTT ATTCCCGATC TGATTCAGGT CAGCAGCAAA
GGCGCAATTT CGATTGGCTG TGCCTTGGCG GGCATGGGCG CTTGGAGCTT GGTTTGGGGC
CAATTGGGTG GCTCGGCCTG TGGCGTGATT GCCTATTGGA TGGTCAATCC ATGGCGACCT
AACTTCAAGA TTGATCGAGC CGTGATCAAG CCGCTGTTGA GCTTTGGTAG CAATATCGTG
GCAGTCAATG GTTTGGCTGT CATGTTGGCG CAAACCGATT ATCTGCTAGT TGGACGCTAT
CTTGGCGATG CAAACTTAGG TATTTATACC AATGGCTTTC GCTTCCCTGA CCTGATGGTG
ATGCAAGTTT GTATTGCCTT GGCCAATGTG CTGTATCCCT TGTACAGTCG TTTGCGCGAT
GATCCTGCTG GGTTGCAACA GGGCTTTTTT ATTGCCTCGC GGTATGTCGC CTTAGTGACT
GTGCCGCTTT CATTGGGAAT TGCAATTACG GCTGAGCCGT TTGTTTTGAC CTTGCTAAGC
GTAAAATGGA TTGAAACTGT GCCGATTATG CGCACAATTG CCATTTACAC CCTGTTTCTT
TCGCTGGGCT ACAACGTTGG TGATGTCTAC AAGGCGCAAA ATCGCACCAG CATTTTGACC
AAGCTTTCAA TCGCTCGTTT AATTGTGTTA GTTCCGGCGT TATGGTTTGC CGCTGCCCAG
TTCAAATCGT TGCAGGCAGT CGGCATTACC CATGCAATTG TGGCATTTTT GGGCAGCACA
CTTAATTTGG TGGTTGCCGC CAAAGTGCTG AACATGCCGA TTCGCCGAAT TTTGAGCGCC
TTCCAACCAG CCATAATTGC TGGCACGGTG ATGAGTACTT GTTTGATTTT GACCCTGCTG
GCCTTGCAAA ACACTCCTGC ATGGCTGCAA CTCTTGGCGG CAGTCGTGGT GGGCATCGGC
TCCTATGCTG GAACTTTGTG GTTTGGTCAG CGCGAAGTTC TGACCCAAGC AGGCCAAACC
TTACGTGGTG CGGTGGCACG GAGATAA
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| Protein sequence | MAKQPETIVQ SAARNTLWSY AATYGGKILI FITTVILAYF VTKAEYGLVG MGLTVIAFLE
VMQDLGIGSA VIYREGEDAA NTAFWLGCGI ALTLFSITWL AAPLVATYFL QNNPDVIPII
RALGLSFPLF AMRNIHDALL RKRMQFKKRF IPDLIQVSSK GAISIGCALA GMGAWSLVWG
QLGGSACGVI AYWMVNPWRP NFKIDRAVIK PLLSFGSNIV AVNGLAVMLA QTDYLLVGRY
LGDANLGIYT NGFRFPDLMV MQVCIALANV LYPLYSRLRD DPAGLQQGFF IASRYVALVT
VPLSLGIAIT AEPFVLTLLS VKWIETVPIM RTIAIYTLFL SLGYNVGDVY KAQNRTSILT
KLSIARLIVL VPALWFAAAQ FKSLQAVGIT HAIVAFLGST LNLVVAAKVL NMPIRRILSA
FQPAIIAGTV MSTCLILTLL ALQNTPAWLQ LLAAVVVGIG SYAGTLWFGQ REVLTQAGQT
LRGAVARR
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