Gene Haur_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3572 
Symbol 
ID5735431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4492272 
End bp4492574 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content49% 
IMG OID641280719 
Producthypothetical protein 
Protein accessionYP_001546336 
Protein GI159900089 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.247512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCACAT TAAATAGTAA TCAGCGCCAA TATTTGCGCC GTTTGGCTCA CGATCTCAAG 
CCTGTGGTGC AAATTGGCAA GCAAGGGCTT TCAAGCACGG TGGTAGCCGC TGTGGCCGCC
GCTCTTGATG CCCATGAATT GATCAAAGTG AAGTTTGGCG AATTTAAAGA AGAACGGCGC
GAATTAACTG ATCAATTAGT GGCTGATACT GAGGCTACGT TGGTCGCGTT GGTGGGCAAT
GTGGCGATTC TGTATCGACC AAGCCGGCTT GATGATAAAC AAGTAATTGT GCTGCCACGC
TAA
 
Protein sequence
MLTLNSNQRQ YLRRLAHDLK PVVQIGKQGL SSTVVAAVAA ALDAHELIKV KFGEFKEERR 
ELTDQLVADT EATLVALVGN VAILYRPSRL DDKQVIVLPR