| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3563 |
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| Symbol | |
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| ID | 5735422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4478386 |
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| End bp | 4480086 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641280710 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001546327 |
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| Protein GI | 159900080 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000136034 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGATGA GTAGTGGTTT CGGGCGCACC TTGCGCGAGG CTCCAAGCGA AGCAGAATTA
GCTGCACATC AATTAATTTT ACGGGCTGGC TTAGCACGGC AATTATTAGC TGGTGGCATG
GCGCTGTTGC CACTGGGCAT GCGAGTATTT CGGCGGATTG AAGCAATTAT GCATGCTGAA
TTAGCTGCTA TCGGTGCTGG TGAATTTCGC ACGCCAGTTG TGCATGCTGC CAGTTTATGG
GAGCAAACCG GACGTTATGC CCAATATGGC GAGGCTATGC TACGCTTCAA CAATCGCAAT
CAACAGGCTT TATTATTTGC GCCAACCCAC GAAGAGGCGG TTGCCGAGCT AGCCCGTCGC
GAGGTTGATT CGTATCGCCA ACTGCCAAGC CTGCTCTACC AAATTCATAC CAAATATCGC
GATGAATTGC GGGTTCGTGG TGGTTTGTTG CGGCTACGCG AATTTACCAT GCTTGATGCC
TATTCGCTTG ATACCGATTG GGCGGGCTTG GATATGGTTT ATGATCGGGT TGCGCTCGCT
TTCGAAACGA TCTTTGAGCG GTGTGGCGTG CGTTTTACCG CTGTCGAAGC CGATGGCGGC
GAGATGGGCG GCCGTGAACC ACGCGAATAT ATGGCGTTTT CGAGCAGCGG CGAAGATAGC
TTGGTGGTTT GCCCGCTCTG CAGTTACGCC GCCAATAGCG AGGTTGCGGT GCGCGGCCAA
GCTGCTGCCA ATGATGATGT CGTACCAGCT ATGAGCGAAA TCGCCACTCC AGCCTGCACC
ACGATTGCCG AACTCGCCAC ATTTTTGCAG GTGAGCGAAG CCCAAACTGC CAAAGCAGTC
TTTTTTAACT CAGCCGAAAA GGGCTTGATT TTCGTGGTGG TGCGCGGTGA TCGTGAAGTC
AATGAAATTA AATTACGAGC GGCGGCAGGT GTTTCGGCGC TTGAGCCAGC CACGCTTGAG
CAAATTAGCG CGGTTGGGGC AGTCGCAGGC TATGCATCGC CAGTTGGCCT GAGCAATGTT
ACAGTAATCG CCGATCATTC GGTGGTTGGC GTTGGTGGCT TGGTTGCTGG AGCCAATCGC
ACAGGCTATC ACTTACAAAA CGTCGTGTAT GGCCGTGATT GGCAAGCAAC CGTGGTTGCT
GATATTGCCA ATGTCGAGGA AGGCGATGCT TGCCCTGTCT GTGGCGCAGC TTTGAGCTTG
GAACGGGGCA TCGAAATTGG TCATATCTTT AAATTAGGCA CTCGTTACAC CGAAGCGCTC
GGCGCAACTT ACCTTGACCC ACAAGGCCAA GCTCAGCCAA TCGTCATGGG TTCGTATGGC
ATTGGCCTCG AACGTTTGTT GCAAGTCATT ATCGAGCAGC ATCACGATGA AAAAGGCATT
GTTTGGCCTG CATCGGTCGC ACCATTCGAT CTGCATTTGG TGCAACTTGG TGCTAGTGCC
ACGGTCAGCG AGGCCGCTAA TCAACTTTAT CAACAATTGA GCGAAGCTGG TCTCAGCGTG
CTCTACGACG ATCGCAATGA ATCGGCGGGA GTCAAATTTA ACGATGCTGA TTTATTGGGC
ATGCCGTTGC GGCTTACGGT TGGCGAACGT GGCCTCAAGC AAAATGTTGT CGAGTTACGC
CAACGAGCAA CTGGGGTAGT CGAGACAATC GCGCTTGATC AAGTGGTGAA GAGTATTAAG
AACATAGAGC ATAGAGCATA G
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| Protein sequence | MRMSSGFGRT LREAPSEAEL AAHQLILRAG LARQLLAGGM ALLPLGMRVF RRIEAIMHAE
LAAIGAGEFR TPVVHAASLW EQTGRYAQYG EAMLRFNNRN QQALLFAPTH EEAVAELARR
EVDSYRQLPS LLYQIHTKYR DELRVRGGLL RLREFTMLDA YSLDTDWAGL DMVYDRVALA
FETIFERCGV RFTAVEADGG EMGGREPREY MAFSSSGEDS LVVCPLCSYA ANSEVAVRGQ
AAANDDVVPA MSEIATPACT TIAELATFLQ VSEAQTAKAV FFNSAEKGLI FVVVRGDREV
NEIKLRAAAG VSALEPATLE QISAVGAVAG YASPVGLSNV TVIADHSVVG VGGLVAGANR
TGYHLQNVVY GRDWQATVVA DIANVEEGDA CPVCGAALSL ERGIEIGHIF KLGTRYTEAL
GATYLDPQGQ AQPIVMGSYG IGLERLLQVI IEQHHDEKGI VWPASVAPFD LHLVQLGASA
TVSEAANQLY QQLSEAGLSV LYDDRNESAG VKFNDADLLG MPLRLTVGER GLKQNVVELR
QRATGVVETI ALDQVVKSIK NIEHRA
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