Gene Haur_3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3550 
Symbol 
ID5735409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4466864 
End bp4467871 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content52% 
IMG OID641280697 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001546314 
Protein GI159900067 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGC TCGAAAGCGT GCCAACGCCC AATCGTCGTT TGCGGCGCGG ACGGCGCAAC 
GCCACATTAC GGCGCATGGT ACGTGAAACT CAATTAACTG TTGATAATCT AATTGCCCCA
TTATTTATTG TTGAAGGCCA GAATATTCGC AAGCCAATTA GCTCGATGCC TGGTCAATTT
CAACTTTCGC TCGATCAGCT CGGCACTGAG ATTGATGAAC TGGTTGCGGC GCAAATTCCA
GCAGTGCTGC TCTTTGGTAT TCCCTTGCAT AAAGATGCTC AAGGTAGCTC AGCTTGGGAT
GCGAATGGCC CTGTGCCTAG CGCAATTCGG GCAATTAAAC AGCAAGCACC ACATTTGGTG
GTAATTGCCG ATGTTTGTAT GTGCGAATAT ACCGACCACG GCCATTGTGG CATTTTAACC
AGCGGTGAGC CAGAAACAAT CACCGTTGAT AATGACCCAA CCTTGGAATT ATTAGCCCGT
GCTTCGGTGG CTTATGCCGA GGCTGGCGCT GATGTGGTTG CTCCCAGCGC CATGATGGAT
GGCCAAATTG CCGCAATTCG CTATGGCCTT GATCAAGCAG GCTACCACGA CACAATTATT
TTGTCGTATG CAGCTAAATT TGCCTCGGCT TTTTATGGCC CGTTCCGCGA AGCTGCTGAA
TCAACACCCC AATTTGGCGA CCGCCGCTCG TACCAAATGG ATGCGGCCAA CGCCCGCGAG
GCGATTGCCG AAACCGCGCT CGATGTCGCC GAGGGAGCAG ATTGGCTGAT GGTCAAGCCA
GCTGGGGCTT ATTTGGATAT TATTCGGGCA GTTTACGAAG AATTTGATCT ACCACTAGCA
GCCTATCAAG TGAGCGGCGA ATATGCCATG ATCAAGGCTG CTGCTGCCAA CGGCTGGATC
GATGAGCAAC GGGTGGCACT TGAAAGCTTG CTGGCAATTC GCCGAGCAGG CGCAAGTATG
ATCATAACCT ATTATGCCAA GGCGGCGGCG CAGTGGTTGA AAGCCTAG
 
Protein sequence
MSMLESVPTP NRRLRRGRRN ATLRRMVRET QLTVDNLIAP LFIVEGQNIR KPISSMPGQF 
QLSLDQLGTE IDELVAAQIP AVLLFGIPLH KDAQGSSAWD ANGPVPSAIR AIKQQAPHLV
VIADVCMCEY TDHGHCGILT SGEPETITVD NDPTLELLAR ASVAYAEAGA DVVAPSAMMD
GQIAAIRYGL DQAGYHDTII LSYAAKFASA FYGPFREAAE STPQFGDRRS YQMDAANARE
AIAETALDVA EGADWLMVKP AGAYLDIIRA VYEEFDLPLA AYQVSGEYAM IKAAAANGWI
DEQRVALESL LAIRRAGASM IITYYAKAAA QWLKA