| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3548 |
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| Symbol | hemC |
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| ID | 5735407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4465005 |
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| End bp | 4465907 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641280695 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001546312 |
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| Protein GI | 159900065 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATAT TAACCATTGG AACGCGCAAA AGCCAATTGG CCTTGGTGCA AACCCACGCC
ATGCGCGATG CCTTGTTGGC GGCGCATCCC CAATTAACGA TCGAACTTGA ACACATCACC
ACCAAGGGCG ATGCGATTTT GGATCGACCA TTGGCGGCGA TTGGCGATAA GGGTCTGTTT
GTCAGCGAAA TTGAGGATGC CATGCGCAAT GGCAAGGTCG ATCTGGCGGT GCATAGTGCC
AAAGATTTGC CTTCAATTTT AGCGCCCGAC ATGACGATTG CAGCCTATCC CGAACGGGCC
GACCCACGCG ATGTCTTGGT TGGAGCCGAA GGGCGCAGGC TTGCCGATTT GGTGCCTGGA
GCCAAGGTTG GCACGAGTAG CCCGCGGCGT GCTGCCCAAT TGCGCCATTT ACGGCCCGAT
CTAACAATTA TTGATATTCG CGGCAATGTT GATACGCGCT TGCGTAAACT TGACGAAGGC
CAATACGATG CGATTGTGTT GGCGGCAGCA GGCTTGCAAC GCTTAGGATT ATTGAAGCGT
GTGACCCAAT TTTTCGAGCC AGCCGAAATG ACTCCAGCGG TTTCGCAGGG CATTTTGGGC
ATCGAAGCAC GGGCAGGCGA TCAACGAGTT GCTGATTTGC TCAAGGTGCT CGATCACGCT
GAATCACGGG CGACTGCTGA AGCCGAAAAA GCCTTTTTGG CCACCATTGG CGGCGGTTGC
CAAGTGGCGG TTGGCGCATT TGCCACCTAT CAAATAGGCC AATTGCACTT AATCGGTATG
ATTGGAGCAC TTGATGGACG CTTAGTGCGC GGTGAATTAA CTGGCAGTGC GAGTACGGCG
CAAGCGCTTG GGACAAGTCT AGCGCAACAA TTATTGGCTC AAGGTGGGAG AGAACTGCTC
TAG
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| Protein sequence | MNILTIGTRK SQLALVQTHA MRDALLAAHP QLTIELEHIT TKGDAILDRP LAAIGDKGLF
VSEIEDAMRN GKVDLAVHSA KDLPSILAPD MTIAAYPERA DPRDVLVGAE GRRLADLVPG
AKVGTSSPRR AAQLRHLRPD LTIIDIRGNV DTRLRKLDEG QYDAIVLAAA GLQRLGLLKR
VTQFFEPAEM TPAVSQGILG IEARAGDQRV ADLLKVLDHA ESRATAEAEK AFLATIGGGC
QVAVGAFATY QIGQLHLIGM IGALDGRLVR GELTGSASTA QALGTSLAQQ LLAQGGRELL
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