Gene Haur_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3535 
Symbol 
ID5735394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4450070 
End bp4450846 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content50% 
IMG OID641280682 
Producthypothetical protein 
Protein accessionYP_001546299 
Protein GI159900052 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTTG CAACGATCAG CAGCACGACC CCACGTTTAA CGGTTAAGTG TGCCACGACG 
AGCGCCGAAA TTGAGCAAGC GCTGCGCTTG CGCTATCGCG TTTTTGTTGA AGAAGCCAAT
AACTCGCGAC TTTGGAACGA CCATGGGCTT GAATATGATG TGTTTGATCA ATGGTGCGAC
CATCTCTTAG TTATCGACCA AAATTGTGAC CAAGTGGTCG GCACCTATCG TTTATTGCCT
GGCGAACGGG CACTAGCCCA TCAAGGCTTT TATTCGCAAA CCGAATTTGA TCTTGCAAAA
TTTAGCCATT TAGCCAATGC CTTGGAGCTT GGGCGCAGTT GTATTGCCGC CGATTATCGT
GGCACACGCG CCATTCAAAT GCTTTGGGGC GGGATTGCCA ACTACCTCGC TGAGCGCCCA
CATAGCCATT TGATTGGCTG CGCCAGCATG AACCACGATG AATTGCCCGA TGTGAGTGCC
TTGTATAGCA TGCTGCGCCA GCATAATGTG ATTACCGATC GCTATCATGT GCAGCCTTTA
GCTAGTCATC GTATGGCCGA TTTGCGTTGT TTGCCCATGA CTTGTAGCGA GCGCGAAATG
GTGCGGCGCT TGCCACCATT AATTAAAGGC TATCGTTGGA TGGGCGCTGA ATTAGCGGGC
GAGCCAGCCT ATGATCCTTT ATTTCATACC ACCGATTTTT TTGTGGTATT TGAAACCAGC
CAAATGACCA AGCGCTATCA ACGCCATTTT GCCAGCTCGT ATCAAGCGAC AGTATGA
 
Protein sequence
MTLATISSTT PRLTVKCATT SAEIEQALRL RYRVFVEEAN NSRLWNDHGL EYDVFDQWCD 
HLLVIDQNCD QVVGTYRLLP GERALAHQGF YSQTEFDLAK FSHLANALEL GRSCIAADYR
GTRAIQMLWG GIANYLAERP HSHLIGCASM NHDELPDVSA LYSMLRQHNV ITDRYHVQPL
ASHRMADLRC LPMTCSEREM VRRLPPLIKG YRWMGAELAG EPAYDPLFHT TDFFVVFETS
QMTKRYQRHF ASSYQATV